Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE2Q96FN4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CPNE2Q96FN4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE2Q96FN4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE2Q96FN4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE2Q96FN4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE2Q96FN4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.16■□□□□ 0.34
CPNE2Q96FN4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CPNE2Q96FN4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE2Q96FN4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CPNE2Q96FN4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE2Q96FN4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CPNE2Q96FN4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE2Q96FN4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE2Q96FN4 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.15■□□□□ 0.34
CPNE2Q96FN4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.15■□□□□ 0.34
CPNE2Q96FN4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.15■□□□□ 0.34
CPNE2Q96FN4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.15■□□□□ 0.34
CPNE2Q96FN4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.15■□□□□ 0.34
CPNE2Q96FN4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE2Q96FN4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE2Q96FN4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.15■□□□□ 0.34
CPNE2Q96FN4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE2Q96FN4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE2Q96FN4 MCRIP2P1-201ENST00000394346 511 ntBASIC17.15■□□□□ 0.34
CPNE2Q96FN4 ZNRF2P3-201ENST00000424200 374 ntBASIC17.15■□□□□ 0.34
CPNE2Q96FN4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.15■□□□□ 0.34
CPNE2Q96FN4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CPNE2Q96FN4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE2Q96FN4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
CPNE2Q96FN4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE2Q96FN4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CPNE2Q96FN4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE2Q96FN4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.15■□□□□ 0.34
CPNE2Q96FN4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.15■□□□□ 0.34
CPNE2Q96FN4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CPNE2Q96FN4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE2Q96FN4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.15■□□□□ 0.34
CPNE2Q96FN4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CPNE2Q96FN4 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.15■□□□□ 0.34
CPNE2Q96FN4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CPNE2Q96FN4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CPNE2Q96FN4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 AL691432.2-201ENST00000607222 2038 ntBASIC17.14■□□□□ 0.33
CPNE2Q96FN4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE2Q96FN4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.13■□□□□ 0.33
CPNE2Q96FN4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE2Q96FN4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.13■□□□□ 0.33
CPNE2Q96FN4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE2Q96FN4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CPNE2Q96FN4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE2Q96FN4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE2Q96FN4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CPNE2Q96FN4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE2Q96FN4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE2Q96FN4 HLA-G-202ENST00000376815 851 ntBASIC17.13■□□□□ 0.33
CPNE2Q96FN4 HLA-G-203ENST00000376818 1127 ntBASIC17.13■□□□□ 0.33
CPNE2Q96FN4 AC137761.2-201ENST00000561729 223 ntBASIC17.13■□□□□ 0.33
CPNE2Q96FN4 AC145350.3-201ENST00000569033 163 ntBASIC17.13■□□□□ 0.33
CPNE2Q96FN4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE2Q96FN4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.13■□□□□ 0.33
CPNE2Q96FN4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.13■□□□□ 0.33
CPNE2Q96FN4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE2Q96FN4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CPNE2Q96FN4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms