Protein–RNA interactions for Protein: Q96D46

NMD3, 60S ribosomal export protein NMD3, humanhuman

Known RBP Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3Q96D46 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.68■□□□□ 0.58
NMD3Q96D46 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NMD3Q96D46 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NMD3Q96D46 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NMD3Q96D46 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.68■□□□□ 0.58
NMD3Q96D46 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NMD3Q96D46 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NMD3Q96D46 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NMD3Q96D46 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NMD3Q96D46 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.68■□□□□ 0.58
NMD3Q96D46 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NMD3Q96D46 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NMD3Q96D46 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.67■□□□□ 0.58
NMD3Q96D46 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NMD3Q96D46 AL138781.2-201ENST00000617896 1843 ntBASIC18.67■□□□□ 0.58
NMD3Q96D46 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NMD3Q96D46 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.67■□□□□ 0.58
NMD3Q96D46 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NMD3Q96D46 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NMD3Q96D46 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NMD3Q96D46 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NMD3Q96D46 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.67■□□□□ 0.58
NMD3Q96D46 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.67■□□□□ 0.58
NMD3Q96D46 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.67■□□□□ 0.58
NMD3Q96D46 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.67■□□□□ 0.58
NMD3Q96D46 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.67■□□□□ 0.58
NMD3Q96D46 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.67■□□□□ 0.58
NMD3Q96D46 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NMD3Q96D46 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NMD3Q96D46 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
NMD3Q96D46 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NMD3Q96D46 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.67■□□□□ 0.58
NMD3Q96D46 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.67■□□□□ 0.58
NMD3Q96D46 AC012313.1-201ENST00000593393 3059 ntBASIC18.67■□□□□ 0.58
NMD3Q96D46 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NMD3Q96D46 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.67■□□□□ 0.58
NMD3Q96D46 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NMD3Q96D46 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NMD3Q96D46 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NMD3Q96D46 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.66■□□□□ 0.58
NMD3Q96D46 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NMD3Q96D46 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NMD3Q96D46 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NMD3Q96D46 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
NMD3Q96D46 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.66■□□□□ 0.58
NMD3Q96D46 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NMD3Q96D46 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.66■□□□□ 0.58
NMD3Q96D46 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.66■□□□□ 0.58
NMD3Q96D46 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NMD3Q96D46 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NMD3Q96D46 ZNRF2P3-201ENST00000424200 374 ntBASIC18.66■□□□□ 0.58
NMD3Q96D46 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.66■□□□□ 0.58
NMD3Q96D46 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.66■□□□□ 0.58
NMD3Q96D46 AC053503.5-201ENST00000601508 636 ntBASIC18.66■□□□□ 0.58
NMD3Q96D46 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NMD3Q96D46 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NMD3Q96D46 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.66■□□□□ 0.58
NMD3Q96D46 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NMD3Q96D46 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NMD3Q96D46 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NMD3Q96D46 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NMD3Q96D46 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.66■□□□□ 0.58
NMD3Q96D46 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.65■□□□□ 0.58
NMD3Q96D46 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
NMD3Q96D46 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NMD3Q96D46 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NMD3Q96D46 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NMD3Q96D46 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NMD3Q96D46 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NMD3Q96D46 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.65■□□□□ 0.58
NMD3Q96D46 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.65■□□□□ 0.58
NMD3Q96D46 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
NMD3Q96D46 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NMD3Q96D46 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.65■□□□□ 0.58
NMD3Q96D46 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.65■□□□□ 0.58
NMD3Q96D46 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NMD3Q96D46 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NMD3Q96D46 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NMD3Q96D46 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
NMD3Q96D46 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NMD3Q96D46 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NMD3Q96D46 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.65■□□□□ 0.58
NMD3Q96D46 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NMD3Q96D46 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NMD3Q96D46 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.65■□□□□ 0.58
NMD3Q96D46 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NMD3Q96D46 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NMD3Q96D46 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NMD3Q96D46 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.65■□□□□ 0.58
NMD3Q96D46 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
NMD3Q96D46 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
NMD3Q96D46 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.64■□□□□ 0.58
NMD3Q96D46 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
NMD3Q96D46 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NMD3Q96D46 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
NMD3Q96D46 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NMD3Q96D46 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NMD3Q96D46 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.64■□□□□ 0.57
NMD3Q96D46 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NMD3Q96D46 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms