Protein–RNA interactions for Protein: Q96CW5

TUBGCP3, Gamma-tubulin complex component 3, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3Q96CW5 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 AC034268.1-201ENST00000441047 882 ntBASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 AL031963.3-201ENST00000606441 850 ntBASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBGCP3Q96CW5 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TUBGCP3Q96CW5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBGCP3Q96CW5 KRT8P20-201ENST00000423953 1409 ntBASIC19.17■□□□□ 0.66
TUBGCP3Q96CW5 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.17■□□□□ 0.66
TUBGCP3Q96CW5 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBGCP3Q96CW5 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBGCP3Q96CW5 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBGCP3Q96CW5 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TUBGCP3Q96CW5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBGCP3Q96CW5 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBGCP3Q96CW5 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.17■□□□□ 0.66
TUBGCP3Q96CW5 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.17■□□□□ 0.66
TUBGCP3Q96CW5 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TUBGCP3Q96CW5 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.17■□□□□ 0.66
TUBGCP3Q96CW5 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
TUBGCP3Q96CW5 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBGCP3Q96CW5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.17■□□□□ 0.66
TUBGCP3Q96CW5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBGCP3Q96CW5 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBGCP3Q96CW5 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.17■□□□□ 0.66
TUBGCP3Q96CW5 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBGCP3Q96CW5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBGCP3Q96CW5 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBGCP3Q96CW5 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TUBGCP3Q96CW5 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBGCP3Q96CW5 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBGCP3Q96CW5 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBGCP3Q96CW5 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
TUBGCP3Q96CW5 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBGCP3Q96CW5 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBGCP3Q96CW5 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TUBGCP3Q96CW5 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TUBGCP3Q96CW5 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBGCP3Q96CW5 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.16■□□□□ 0.66
TUBGCP3Q96CW5 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBGCP3Q96CW5 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBGCP3Q96CW5 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.16■□□□□ 0.66
TUBGCP3Q96CW5 RARRES2P4-201ENST00000514074 484 ntBASIC19.16■□□□□ 0.66
TUBGCP3Q96CW5 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.16■□□□□ 0.66
TUBGCP3Q96CW5 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TUBGCP3Q96CW5 AC100791.3-201ENST00000617619 330 ntBASIC19.16■□□□□ 0.66
TUBGCP3Q96CW5 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.16■□□□□ 0.66
TUBGCP3Q96CW5 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBGCP3Q96CW5 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.16■□□□□ 0.66
TUBGCP3Q96CW5 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
TUBGCP3Q96CW5 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TUBGCP3Q96CW5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBGCP3Q96CW5 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TUBGCP3Q96CW5 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBGCP3Q96CW5 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBGCP3Q96CW5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.16■□□□□ 0.66
TUBGCP3Q96CW5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.16■□□□□ 0.66
TUBGCP3Q96CW5 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms