Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
VPS33AQ96AX1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS33AQ96AX1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VPS33AQ96AX1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VPS33AQ96AX1 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.99■□□□□ 0.63
VPS33AQ96AX1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.99■□□□□ 0.63
VPS33AQ96AX1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.99■□□□□ 0.63
VPS33AQ96AX1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.99■□□□□ 0.63
VPS33AQ96AX1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
VPS33AQ96AX1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
VPS33AQ96AX1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VPS33AQ96AX1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS33AQ96AX1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS33AQ96AX1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
VPS33AQ96AX1 Z82202.1-201ENST00000623446 1880 ntBASIC18.99■□□□□ 0.63
VPS33AQ96AX1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.99■□□□□ 0.63
VPS33AQ96AX1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS33AQ96AX1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS33AQ96AX1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS33AQ96AX1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.98■□□□□ 0.63
VPS33AQ96AX1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
VPS33AQ96AX1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS33AQ96AX1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS33AQ96AX1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS33AQ96AX1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VPS33AQ96AX1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS33AQ96AX1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.98■□□□□ 0.63
VPS33AQ96AX1 TERF1P5-201ENST00000477545 1207 ntBASIC18.98■□□□□ 0.63
VPS33AQ96AX1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.98■□□□□ 0.63
VPS33AQ96AX1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.98■□□□□ 0.63
VPS33AQ96AX1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS33AQ96AX1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS33AQ96AX1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.98■□□□□ 0.63
VPS33AQ96AX1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS33AQ96AX1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS33AQ96AX1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS33AQ96AX1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS33AQ96AX1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS33AQ96AX1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS33AQ96AX1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
VPS33AQ96AX1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS33AQ96AX1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS33AQ96AX1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS33AQ96AX1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
VPS33AQ96AX1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS33AQ96AX1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.97■□□□□ 0.63
VPS33AQ96AX1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.97■□□□□ 0.63
VPS33AQ96AX1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS33AQ96AX1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.97■□□□□ 0.63
VPS33AQ96AX1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.97■□□□□ 0.63
VPS33AQ96AX1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VPS33AQ96AX1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.97■□□□□ 0.63
VPS33AQ96AX1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.97■□□□□ 0.63
VPS33AQ96AX1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VPS33AQ96AX1 AC016405.3-201ENST00000607710 860 ntBASIC18.97■□□□□ 0.63
VPS33AQ96AX1 AC010536.3-201ENST00000620306 533 ntBASIC18.97■□□□□ 0.63
VPS33AQ96AX1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
VPS33AQ96AX1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.97■□□□□ 0.63
VPS33AQ96AX1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS33AQ96AX1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS33AQ96AX1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.97■□□□□ 0.63
VPS33AQ96AX1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.97■□□□□ 0.63
VPS33AQ96AX1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.97■□□□□ 0.63
VPS33AQ96AX1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VPS33AQ96AX1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.96■□□□□ 0.63
VPS33AQ96AX1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS33AQ96AX1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.96■□□□□ 0.63
VPS33AQ96AX1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.96■□□□□ 0.63
VPS33AQ96AX1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VPS33AQ96AX1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.96■□□□□ 0.63
VPS33AQ96AX1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
VPS33AQ96AX1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS33AQ96AX1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VPS33AQ96AX1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
VPS33AQ96AX1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS33AQ96AX1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS33AQ96AX1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
VPS33AQ96AX1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.95■□□□□ 0.62
VPS33AQ96AX1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
VPS33AQ96AX1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
VPS33AQ96AX1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VPS33AQ96AX1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS33AQ96AX1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.95■□□□□ 0.62
VPS33AQ96AX1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VPS33AQ96AX1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
VPS33AQ96AX1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS33AQ96AX1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS33AQ96AX1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
VPS33AQ96AX1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
VPS33AQ96AX1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VPS33AQ96AX1 KRT8P17-201ENST00000453110 1448 ntBASIC18.95■□□□□ 0.62
VPS33AQ96AX1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS33AQ96AX1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS33AQ96AX1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.95■□□□□ 0.62
VPS33AQ96AX1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
VPS33AQ96AX1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
VPS33AQ96AX1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS33AQ96AX1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS33AQ96AX1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
VPS33AQ96AX1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms