Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2A3Q93084 RPS2P55-201ENST00000397318 883 ntBASIC20.83■□□□□ 0.93
ATP2A3Q93084 KRASP1-201ENST00000407852 552 ntBASIC20.83■□□□□ 0.93
ATP2A3Q93084 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2A3Q93084 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.83■□□□□ 0.93
ATP2A3Q93084 AC107956.1-201ENST00000494359 873 ntBASIC20.83■□□□□ 0.93
ATP2A3Q93084 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.83■□□□□ 0.93
ATP2A3Q93084 AC233702.5-201ENST00000584107 538 ntBASIC20.83■□□□□ 0.93
ATP2A3Q93084 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
ATP2A3Q93084 AL135905.2-201ENST00000584934 1404 ntBASIC20.83■□□□□ 0.93
ATP2A3Q93084 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP2A3Q93084 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
ATP2A3Q93084 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
ATP2A3Q93084 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP2A3Q93084 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP2A3Q93084 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP2A3Q93084 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ATP2A3Q93084 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A3Q93084 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A3Q93084 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A3Q93084 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A3Q93084 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A3Q93084 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.82■□□□□ 0.92
ATP2A3Q93084 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ATP2A3Q93084 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.82■□□□□ 0.92
ATP2A3Q93084 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.82■□□□□ 0.92
ATP2A3Q93084 AP001412.1-201ENST00000608405 714 ntBASIC20.82■□□□□ 0.92
ATP2A3Q93084 AP005212.1-201ENST00000581547 1997 ntBASIC20.82■□□□□ 0.92
ATP2A3Q93084 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.82■□□□□ 0.92
ATP2A3Q93084 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A3Q93084 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A3Q93084 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A3Q93084 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
ATP2A3Q93084 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A3Q93084 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.82■□□□□ 0.92
ATP2A3Q93084 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.82■□□□□ 0.92
ATP2A3Q93084 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ATP2A3Q93084 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A3Q93084 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP2A3Q93084 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
ATP2A3Q93084 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A3Q93084 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP2A3Q93084 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A3Q93084 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A3Q93084 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A3Q93084 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ATP2A3Q93084 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A3Q93084 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A3Q93084 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A3Q93084 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ATP2A3Q93084 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ATP2A3Q93084 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A3Q93084 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.81■□□□□ 0.92
ATP2A3Q93084 AC023632.3-201ENST00000521633 145 ntBASIC20.81■□□□□ 0.92
ATP2A3Q93084 PRKY-204ENST00000533551 1019 ntBASIC20.81■□□□□ 0.92
ATP2A3Q93084 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A3Q93084 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ATP2A3Q93084 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A3Q93084 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A3Q93084 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
ATP2A3Q93084 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ATP2A3Q93084 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
ATP2A3Q93084 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
ATP2A3Q93084 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ATP2A3Q93084 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A3Q93084 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
ATP2A3Q93084 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP2A3Q93084 AC121338.2-201ENST00000622535 1744 ntBASIC20.81■□□□□ 0.92
ATP2A3Q93084 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A3Q93084 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A3Q93084 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP2A3Q93084 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ATP2A3Q93084 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP2A3Q93084 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A3Q93084 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A3Q93084 KRT8P36-201ENST00000489121 1440 ntBASIC20.8■□□□□ 0.92
ATP2A3Q93084 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A3Q93084 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ATP2A3Q93084 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.8■□□□□ 0.92
ATP2A3Q93084 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ATP2A3Q93084 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A3Q93084 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ATP2A3Q93084 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP2A3Q93084 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A3Q93084 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.8■□□□□ 0.92
ATP2A3Q93084 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.8■□□□□ 0.92
ATP2A3Q93084 MIR2861-201ENST00000636310 90 ntBASIC20.8■□□□□ 0.92
ATP2A3Q93084 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ATP2A3Q93084 AC092667.1-201ENST00000434301 2586 ntBASIC20.8■□□□□ 0.92
ATP2A3Q93084 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP2A3Q93084 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A3Q93084 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A3Q93084 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A3Q93084 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.79■□□□□ 0.92
ATP2A3Q93084 AIRN-201ENST00000601203 4374 ntBASIC20.79■□□□□ 0.92
ATP2A3Q93084 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A3Q93084 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A3Q93084 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.79■□□□□ 0.92
ATP2A3Q93084 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.79■□□□□ 0.92
ATP2A3Q93084 AL121603.2-201ENST00000557373 2117 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms