Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC22.2■■□□□ 1.14
ATP6V0A1Q93050 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC22.2■■□□□ 1.14
ATP6V0A1Q93050 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
ATP6V0A1Q93050 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.2■■□□□ 1.14
ATP6V0A1Q93050 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC22.2■■□□□ 1.14
ATP6V0A1Q93050 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.2■■□□□ 1.14
ATP6V0A1Q93050 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC22.2■■□□□ 1.14
ATP6V0A1Q93050 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ATP6V0A1Q93050 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ATP6V0A1Q93050 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
ATP6V0A1Q93050 GABARAPL3-202ENST00000624044 1851 ntBASIC22.2■■□□□ 1.14
ATP6V0A1Q93050 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V0A1Q93050 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
ATP6V0A1Q93050 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V0A1Q93050 AC087499.1-201ENST00000418141 1075 ntBASIC22.19■■□□□ 1.14
ATP6V0A1Q93050 RPS15-203ENST00000586096 570 ntTSL 2 BASIC22.19■■□□□ 1.14
ATP6V0A1Q93050 AC026471.5-201ENST00000615068 467 ntBASIC22.19■■□□□ 1.14
ATP6V0A1Q93050 AC133561.5-201ENST00000635547 218 ntBASIC22.19■■□□□ 1.14
ATP6V0A1Q93050 BX119927.1-201ENST00000636596 1552 ntBASIC22.19■■□□□ 1.14
ATP6V0A1Q93050 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V0A1Q93050 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V0A1Q93050 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V0A1Q93050 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.19■■□□□ 1.14
ATP6V0A1Q93050 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.19■■□□□ 1.14
ATP6V0A1Q93050 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
ATP6V0A1Q93050 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
ATP6V0A1Q93050 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
ATP6V0A1Q93050 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
ATP6V0A1Q93050 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ATP6V0A1Q93050 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
ATP6V0A1Q93050 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ATP6V0A1Q93050 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ATP6V0A1Q93050 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC22.18■■□□□ 1.14
ATP6V0A1Q93050 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC22.18■■□□□ 1.14
ATP6V0A1Q93050 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ATP6V0A1Q93050 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
ATP6V0A1Q93050 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
ATP6V0A1Q93050 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC22.18■■□□□ 1.14
ATP6V0A1Q93050 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ATP6V0A1Q93050 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ATP6V0A1Q93050 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ATP6V0A1Q93050 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ATP6V0A1Q93050 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ATP6V0A1Q93050 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
ATP6V0A1Q93050 STK25-204ENST00000405585 1643 ntTSL 2 BASIC22.17■■□□□ 1.14
ATP6V0A1Q93050 AC116351.2-201ENST00000606540 1585 ntBASIC22.17■■□□□ 1.14
ATP6V0A1Q93050 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ATP6V0A1Q93050 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ATP6V0A1Q93050 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
ATP6V0A1Q93050 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
ATP6V0A1Q93050 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
ATP6V0A1Q93050 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ATP6V0A1Q93050 AL353807.1-201ENST00000427475 662 ntBASIC22.17■■□□□ 1.14
ATP6V0A1Q93050 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ATP6V0A1Q93050 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ATP6V0A1Q93050 AP003071.4-201ENST00000562276 1284 ntBASIC22.17■■□□□ 1.14
ATP6V0A1Q93050 GRAP-204ENST00000573099 846 ntTSL 3 BASIC22.17■■□□□ 1.14
ATP6V0A1Q93050 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC22.17■■□□□ 1.14
ATP6V0A1Q93050 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ATP6V0A1Q93050 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ATP6V0A1Q93050 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
ATP6V0A1Q93050 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC22.17■■□□□ 1.14
ATP6V0A1Q93050 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC22.16■■□□□ 1.14
ATP6V0A1Q93050 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ATP6V0A1Q93050 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ATP6V0A1Q93050 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
ATP6V0A1Q93050 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ATP6V0A1Q93050 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ATP6V0A1Q93050 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22.16■■□□□ 1.14
ATP6V0A1Q93050 AL355355.2-201ENST00000442321 338 ntBASIC22.16■■□□□ 1.14
ATP6V0A1Q93050 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.16■■□□□ 1.14
ATP6V0A1Q93050 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC22.16■■□□□ 1.14
ATP6V0A1Q93050 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC22.16■■□□□ 1.14
ATP6V0A1Q93050 CD177P1-201ENST00000606252 935 ntBASIC22.16■■□□□ 1.14
ATP6V0A1Q93050 AC004264.1-201ENST00000608354 794 ntBASIC22.16■■□□□ 1.14
ATP6V0A1Q93050 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
ATP6V0A1Q93050 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ATP6V0A1Q93050 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.16■■□□□ 1.14
ATP6V0A1Q93050 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ATP6V0A1Q93050 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ATP6V0A1Q93050 PHGDH-210ENST00000641115 1638 ntBASIC22.16■■□□□ 1.14
ATP6V0A1Q93050 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
ATP6V0A1Q93050 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.16■■□□□ 1.14
ATP6V0A1Q93050 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
ATP6V0A1Q93050 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ATP6V0A1Q93050 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ATP6V0A1Q93050 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
ATP6V0A1Q93050 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
ATP6V0A1Q93050 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
ATP6V0A1Q93050 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC22.15■■□□□ 1.14
ATP6V0A1Q93050 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ATP6V0A1Q93050 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
ATP6V0A1Q93050 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC22.15■■□□□ 1.14
ATP6V0A1Q93050 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
ATP6V0A1Q93050 KRT18P21-201ENST00000515767 1272 ntBASIC22.15■■□□□ 1.14
ATP6V0A1Q93050 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.15■■□□□ 1.14
ATP6V0A1Q93050 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC22.15■■□□□ 1.14
ATP6V0A1Q93050 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC22.15■■□□□ 1.14
ATP6V0A1Q93050 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC22.15■■□□□ 1.14
ATP6V0A1Q93050 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms