Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.31■■□□□ 1.32
BRF1Q92994 AC092368.3-202ENST00000574180 1591 ntBASIC23.31■■□□□ 1.32
BRF1Q92994 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
BRF1Q92994 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC23.31■■□□□ 1.32
BRF1Q92994 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
BRF1Q92994 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.31■■□□□ 1.32
BRF1Q92994 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
BRF1Q92994 ID1-201ENST00000376105 1233 ntBASIC23.31■■□□□ 1.32
BRF1Q92994 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
BRF1Q92994 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
BRF1Q92994 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
BRF1Q92994 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.31■■□□□ 1.32
BRF1Q92994 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
BRF1Q92994 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
BRF1Q92994 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
BRF1Q92994 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
BRF1Q92994 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
BRF1Q92994 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
BRF1Q92994 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
BRF1Q92994 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC23.31■■□□□ 1.32
BRF1Q92994 AP001271.2-201ENST00000624018 1556 ntBASIC23.31■■□□□ 1.32
BRF1Q92994 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
BRF1Q92994 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
BRF1Q92994 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC23.3■■□□□ 1.32
BRF1Q92994 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC23.3■■□□□ 1.32
BRF1Q92994 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC23.3■■□□□ 1.32
BRF1Q92994 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
BRF1Q92994 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC23.3■■□□□ 1.32
BRF1Q92994 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.3■■□□□ 1.32
BRF1Q92994 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
BRF1Q92994 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.3■■□□□ 1.32
BRF1Q92994 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
BRF1Q92994 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC23.3■■□□□ 1.32
BRF1Q92994 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
BRF1Q92994 AC007952.6-201ENST00000573168 2673 ntBASIC23.3■■□□□ 1.32
BRF1Q92994 AC003957.1-201ENST00000625108 2673 ntBASIC23.3■■□□□ 1.32
BRF1Q92994 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.3■■□□□ 1.32
BRF1Q92994 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC23.29■■□□□ 1.32
BRF1Q92994 AC124283.5-201ENST00000624661 1809 ntBASIC23.29■■□□□ 1.32
BRF1Q92994 PWWP2AP1-201ENST00000429776 2273 ntBASIC23.29■■□□□ 1.32
BRF1Q92994 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
BRF1Q92994 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC23.29■■□□□ 1.32
BRF1Q92994 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.29■■□□□ 1.32
BRF1Q92994 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.29■■□□□ 1.32
BRF1Q92994 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.29■■□□□ 1.32
BRF1Q92994 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
BRF1Q92994 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.29■■□□□ 1.32
BRF1Q92994 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.29■■□□□ 1.32
BRF1Q92994 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.29■■□□□ 1.32
BRF1Q92994 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.29■■□□□ 1.32
BRF1Q92994 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
BRF1Q92994 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC23.29■■□□□ 1.32
BRF1Q92994 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
BRF1Q92994 TREX1-205ENST00000625293 1783 ntBASIC23.29■■□□□ 1.32
BRF1Q92994 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
BRF1Q92994 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23.29■■□□□ 1.32
BRF1Q92994 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
BRF1Q92994 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BRF1Q92994 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC23.28■■□□□ 1.32
BRF1Q92994 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC23.28■■□□□ 1.32
BRF1Q92994 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
BRF1Q92994 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC23.28■■□□□ 1.32
BRF1Q92994 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BRF1Q92994 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BRF1Q92994 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BRF1Q92994 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC23.28■■□□□ 1.32
BRF1Q92994 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC23.28■■□□□ 1.32
BRF1Q92994 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
BRF1Q92994 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.28■■□□□ 1.32
BRF1Q92994 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
BRF1Q92994 PNMA6B-201ENST00000538162 1200 ntBASIC23.28■■□□□ 1.32
BRF1Q92994 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.28■■□□□ 1.32
BRF1Q92994 AC060766.5-201ENST00000590539 871 ntBASIC23.28■■□□□ 1.32
BRF1Q92994 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
BRF1Q92994 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC23.28■■□□□ 1.32
BRF1Q92994 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC23.28■■□□□ 1.32
BRF1Q92994 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
BRF1Q92994 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
BRF1Q92994 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
BRF1Q92994 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23.27■■□□□ 1.32
BRF1Q92994 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
BRF1Q92994 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
BRF1Q92994 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC23.27■■□□□ 1.32
BRF1Q92994 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
BRF1Q92994 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
BRF1Q92994 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
BRF1Q92994 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC23.27■■□□□ 1.32
BRF1Q92994 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.27■■□□□ 1.32
BRF1Q92994 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
BRF1Q92994 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.27■■□□□ 1.32
BRF1Q92994 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.27■■□□□ 1.32
BRF1Q92994 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.27■■□□□ 1.32
BRF1Q92994 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
BRF1Q92994 AC018553.1-201ENST00000616682 1458 ntBASIC23.27■■□□□ 1.32
BRF1Q92994 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC23.27■■□□□ 1.32
BRF1Q92994 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
BRF1Q92994 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
BRF1Q92994 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
BRF1Q92994 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC23.27■■□□□ 1.31
BRF1Q92994 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms