Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.64■□□□□ 0.25
RTN4IP1Q8WWV3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.64■□□□□ 0.25
RTN4IP1Q8WWV3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RTN4IP1Q8WWV3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTN4IP1Q8WWV3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTN4IP1Q8WWV3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.64■□□□□ 0.25
RTN4IP1Q8WWV3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RTN4IP1Q8WWV3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RTN4IP1Q8WWV3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTN4IP1Q8WWV3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 KRT8P36-201ENST00000489121 1440 ntBASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 TREX1-205ENST00000625293 1783 ntBASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.63■□□□□ 0.25
RTN4IP1Q8WWV3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RTN4IP1Q8WWV3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RTN4IP1Q8WWV3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTN4IP1Q8WWV3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTN4IP1Q8WWV3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTN4IP1Q8WWV3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTN4IP1Q8WWV3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RTN4IP1Q8WWV3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTN4IP1Q8WWV3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RTN4IP1Q8WWV3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTN4IP1Q8WWV3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
RTN4IP1Q8WWV3 AL162412.1-201ENST00000567129 965 ntBASIC16.62■□□□□ 0.25
RTN4IP1Q8WWV3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.62■□□□□ 0.25
RTN4IP1Q8WWV3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTN4IP1Q8WWV3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RTN4IP1Q8WWV3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RTN4IP1Q8WWV3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTN4IP1Q8WWV3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTN4IP1Q8WWV3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTN4IP1Q8WWV3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RTN4IP1Q8WWV3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.62■□□□□ 0.25
RTN4IP1Q8WWV3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.62■□□□□ 0.25
RTN4IP1Q8WWV3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RTN4IP1Q8WWV3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 CNN2P6-201ENST00000439038 900 ntBASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 FAM21FP-204ENST00000608637 956 ntBASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.61■□□□□ 0.25
RTN4IP1Q8WWV3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms