Protein–RNA interactions for Protein: Q8TDG2

ACTRT1, Actin-related protein T1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTRT1Q8TDG2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ACTRT1Q8TDG2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.63■□□□□ 0.89
ACTRT1Q8TDG2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACTRT1Q8TDG2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACTRT1Q8TDG2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACTRT1Q8TDG2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ACTRT1Q8TDG2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.63■□□□□ 0.89
ACTRT1Q8TDG2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.63■□□□□ 0.89
ACTRT1Q8TDG2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACTRT1Q8TDG2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACTRT1Q8TDG2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACTRT1Q8TDG2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ACTRT1Q8TDG2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ACTRT1Q8TDG2 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.63■□□□□ 0.89
ACTRT1Q8TDG2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACTRT1Q8TDG2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTRT1Q8TDG2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ACTRT1Q8TDG2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTRT1Q8TDG2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ACTRT1Q8TDG2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTRT1Q8TDG2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTRT1Q8TDG2 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ACTRT1Q8TDG2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
ACTRT1Q8TDG2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.62■□□□□ 0.89
ACTRT1Q8TDG2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTRT1Q8TDG2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.62■□□□□ 0.89
ACTRT1Q8TDG2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.62■□□□□ 0.89
ACTRT1Q8TDG2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTRT1Q8TDG2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.62■□□□□ 0.89
ACTRT1Q8TDG2 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTRT1Q8TDG2 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTRT1Q8TDG2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTRT1Q8TDG2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ACTRT1Q8TDG2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.62■□□□□ 0.89
ACTRT1Q8TDG2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTRT1Q8TDG2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ACTRT1Q8TDG2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ACTRT1Q8TDG2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTRT1Q8TDG2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.62■□□□□ 0.89
ACTRT1Q8TDG2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACTRT1Q8TDG2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACTRT1Q8TDG2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ACTRT1Q8TDG2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.61■□□□□ 0.89
ACTRT1Q8TDG2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACTRT1Q8TDG2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACTRT1Q8TDG2 PHGDH-210ENST00000641115 1638 ntBASIC20.61■□□□□ 0.89
ACTRT1Q8TDG2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACTRT1Q8TDG2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ACTRT1Q8TDG2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACTRT1Q8TDG2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACTRT1Q8TDG2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ACTRT1Q8TDG2 MCRIP2P1-201ENST00000394346 511 ntBASIC20.61■□□□□ 0.89
ACTRT1Q8TDG2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ACTRT1Q8TDG2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.61■□□□□ 0.89
ACTRT1Q8TDG2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ACTRT1Q8TDG2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACTRT1Q8TDG2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.61■□□□□ 0.89
ACTRT1Q8TDG2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ACTRT1Q8TDG2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACTRT1Q8TDG2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACTRT1Q8TDG2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACTRT1Q8TDG2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACTRT1Q8TDG2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ACTRT1Q8TDG2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ACTRT1Q8TDG2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACTRT1Q8TDG2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ACTRT1Q8TDG2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACTRT1Q8TDG2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACTRT1Q8TDG2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ACTRT1Q8TDG2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
ACTRT1Q8TDG2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ACTRT1Q8TDG2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ACTRT1Q8TDG2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ACTRT1Q8TDG2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACTRT1Q8TDG2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ACTRT1Q8TDG2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACTRT1Q8TDG2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACTRT1Q8TDG2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
ACTRT1Q8TDG2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ACTRT1Q8TDG2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ACTRT1Q8TDG2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACTRT1Q8TDG2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACTRT1Q8TDG2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACTRT1Q8TDG2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACTRT1Q8TDG2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACTRT1Q8TDG2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ACTRT1Q8TDG2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
ACTRT1Q8TDG2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACTRT1Q8TDG2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ACTRT1Q8TDG2 HLA-G-202ENST00000376815 851 ntBASIC20.59■□□□□ 0.89
ACTRT1Q8TDG2 HLA-G-203ENST00000376818 1127 ntBASIC20.59■□□□□ 0.89
ACTRT1Q8TDG2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACTRT1Q8TDG2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.59■□□□□ 0.89
ACTRT1Q8TDG2 AC105020.6-201ENST00000621523 1217 ntBASIC20.59■□□□□ 0.89
ACTRT1Q8TDG2 AC013268.1-206ENST00000638368 961 ntBASIC20.59■□□□□ 0.89
ACTRT1Q8TDG2 AC112229.1-201ENST00000639295 961 ntBASIC20.59■□□□□ 0.89
ACTRT1Q8TDG2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACTRT1Q8TDG2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACTRT1Q8TDG2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACTRT1Q8TDG2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms