Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC23.54■■□□□ 1.36
NKX2-3Q8TAU0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.54■■□□□ 1.36
NKX2-3Q8TAU0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NKX2-3Q8TAU0 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC23.53■■□□□ 1.36
NKX2-3Q8TAU0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC23.53■■□□□ 1.36
NKX2-3Q8TAU0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NKX2-3Q8TAU0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
NKX2-3Q8TAU0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NKX2-3Q8TAU0 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.53■■□□□ 1.36
NKX2-3Q8TAU0 TMPOP1-202ENST00000424642 1267 ntBASIC23.53■■□□□ 1.36
NKX2-3Q8TAU0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
NKX2-3Q8TAU0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
NKX2-3Q8TAU0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC23.53■■□□□ 1.36
NKX2-3Q8TAU0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC23.53■■□□□ 1.36
NKX2-3Q8TAU0 KRT18P35-201ENST00000510488 1269 ntBASIC23.53■■□□□ 1.36
NKX2-3Q8TAU0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NKX2-3Q8TAU0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NKX2-3Q8TAU0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
NKX2-3Q8TAU0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC23.53■■□□□ 1.36
NKX2-3Q8TAU0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC23.53■■□□□ 1.36
NKX2-3Q8TAU0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
NKX2-3Q8TAU0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NKX2-3Q8TAU0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
NKX2-3Q8TAU0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NKX2-3Q8TAU0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.53■■□□□ 1.36
NKX2-3Q8TAU0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.52■■□□□ 1.36
NKX2-3Q8TAU0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC23.52■■□□□ 1.36
NKX2-3Q8TAU0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NKX2-3Q8TAU0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NKX2-3Q8TAU0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC23.52■■□□□ 1.36
NKX2-3Q8TAU0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NKX2-3Q8TAU0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.52■■□□□ 1.36
NKX2-3Q8TAU0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
NKX2-3Q8TAU0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC23.52■■□□□ 1.36
NKX2-3Q8TAU0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC23.52■■□□□ 1.36
NKX2-3Q8TAU0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC23.52■■□□□ 1.36
NKX2-3Q8TAU0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.52■■□□□ 1.36
NKX2-3Q8TAU0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NKX2-3Q8TAU0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC23.52■■□□□ 1.36
NKX2-3Q8TAU0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
NKX2-3Q8TAU0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NKX2-3Q8TAU0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NKX2-3Q8TAU0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.51■■□□□ 1.35
NKX2-3Q8TAU0 TCF3P1-201ENST00000423021 1937 ntBASIC23.51■■□□□ 1.35
NKX2-3Q8TAU0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
NKX2-3Q8TAU0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC23.51■■□□□ 1.35
NKX2-3Q8TAU0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
NKX2-3Q8TAU0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC23.51■■□□□ 1.35
NKX2-3Q8TAU0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
NKX2-3Q8TAU0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC23.51■■□□□ 1.35
NKX2-3Q8TAU0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NKX2-3Q8TAU0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NKX2-3Q8TAU0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
NKX2-3Q8TAU0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
NKX2-3Q8TAU0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NKX2-3Q8TAU0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC23.51■■□□□ 1.35
NKX2-3Q8TAU0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NKX2-3Q8TAU0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NKX2-3Q8TAU0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC23.5■■□□□ 1.35
NKX2-3Q8TAU0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC23.5■■□□□ 1.35
NKX2-3Q8TAU0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
NKX2-3Q8TAU0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.5■■□□□ 1.35
NKX2-3Q8TAU0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NKX2-3Q8TAU0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
NKX2-3Q8TAU0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NKX2-3Q8TAU0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
NKX2-3Q8TAU0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.5■■□□□ 1.35
NKX2-3Q8TAU0 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NKX2-3Q8TAU0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
NKX2-3Q8TAU0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NKX2-3Q8TAU0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC23.5■■□□□ 1.35
NKX2-3Q8TAU0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
NKX2-3Q8TAU0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC23.5■■□□□ 1.35
NKX2-3Q8TAU0 AL590326.2-201ENST00000625139 305 ntBASIC23.5■■□□□ 1.35
NKX2-3Q8TAU0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
NKX2-3Q8TAU0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
NKX2-3Q8TAU0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC23.5■■□□□ 1.35
NKX2-3Q8TAU0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NKX2-3Q8TAU0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NKX2-3Q8TAU0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
NKX2-3Q8TAU0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NKX2-3Q8TAU0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.49■■□□□ 1.35
NKX2-3Q8TAU0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
NKX2-3Q8TAU0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.49■■□□□ 1.35
NKX2-3Q8TAU0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
NKX2-3Q8TAU0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NKX2-3Q8TAU0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
NKX2-3Q8TAU0 AC133681.1-201ENST00000465482 601 ntBASIC23.49■■□□□ 1.35
NKX2-3Q8TAU0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NKX2-3Q8TAU0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC23.49■■□□□ 1.35
NKX2-3Q8TAU0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
NKX2-3Q8TAU0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
NKX2-3Q8TAU0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
NKX2-3Q8TAU0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC23.49■■□□□ 1.35
NKX2-3Q8TAU0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
NKX2-3Q8TAU0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC23.49■■□□□ 1.35
NKX2-3Q8TAU0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
NKX2-3Q8TAU0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
NKX2-3Q8TAU0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
NKX2-3Q8TAU0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms