Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
COLGALT1Q8NBJ5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COLGALT1Q8NBJ5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COLGALT1Q8NBJ5 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
COLGALT1Q8NBJ5 AC005521.1-201ENST00000393351 872 ntBASIC21.36■■□□□ 1.01
COLGALT1Q8NBJ5 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.36■■□□□ 1.01
COLGALT1Q8NBJ5 AL390955.1-201ENST00000428694 934 ntBASIC21.36■■□□□ 1.01
COLGALT1Q8NBJ5 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.36■■□□□ 1.01
COLGALT1Q8NBJ5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COLGALT1Q8NBJ5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.36■■□□□ 1.01
COLGALT1Q8NBJ5 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.36■■□□□ 1.01
COLGALT1Q8NBJ5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COLGALT1Q8NBJ5 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COLGALT1Q8NBJ5 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.36■■□□□ 1.01
COLGALT1Q8NBJ5 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
COLGALT1Q8NBJ5 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
COLGALT1Q8NBJ5 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COLGALT1Q8NBJ5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
COLGALT1Q8NBJ5 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.36■■□□□ 1.01
COLGALT1Q8NBJ5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COLGALT1Q8NBJ5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.35■■□□□ 1.01
COLGALT1Q8NBJ5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COLGALT1Q8NBJ5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COLGALT1Q8NBJ5 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
COLGALT1Q8NBJ5 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
COLGALT1Q8NBJ5 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COLGALT1Q8NBJ5 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COLGALT1Q8NBJ5 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.35■■□□□ 1.01
COLGALT1Q8NBJ5 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.35■■□□□ 1.01
COLGALT1Q8NBJ5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.35■■□□□ 1.01
COLGALT1Q8NBJ5 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
COLGALT1Q8NBJ5 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
COLGALT1Q8NBJ5 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.35■■□□□ 1.01
COLGALT1Q8NBJ5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.35■■□□□ 1.01
COLGALT1Q8NBJ5 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COLGALT1Q8NBJ5 KRT16P1-201ENST00000399124 1418 ntBASIC21.35■■□□□ 1.01
COLGALT1Q8NBJ5 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COLGALT1Q8NBJ5 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COLGALT1Q8NBJ5 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COLGALT1Q8NBJ5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COLGALT1Q8NBJ5 LINC01568-207ENST00000641790 1380 ntBASIC21.35■■□□□ 1.01
COLGALT1Q8NBJ5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
COLGALT1Q8NBJ5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.35■■□□□ 1.01
COLGALT1Q8NBJ5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COLGALT1Q8NBJ5 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COLGALT1Q8NBJ5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COLGALT1Q8NBJ5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COLGALT1Q8NBJ5 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
COLGALT1Q8NBJ5 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
COLGALT1Q8NBJ5 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COLGALT1Q8NBJ5 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.34■■□□□ 1.01
COLGALT1Q8NBJ5 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COLGALT1Q8NBJ5 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.34■■□□□ 1.01
COLGALT1Q8NBJ5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.34■■□□□ 1.01
COLGALT1Q8NBJ5 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.34■■□□□ 1.01
COLGALT1Q8NBJ5 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.34■■□□□ 1.01
COLGALT1Q8NBJ5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.34■■□□□ 1.01
COLGALT1Q8NBJ5 FITM1-202ENST00000559294 800 ntBASIC21.34■■□□□ 1.01
COLGALT1Q8NBJ5 AL049597.2-201ENST00000565575 961 ntBASIC21.34■■□□□ 1.01
COLGALT1Q8NBJ5 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COLGALT1Q8NBJ5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
COLGALT1Q8NBJ5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
COLGALT1Q8NBJ5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COLGALT1Q8NBJ5 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
COLGALT1Q8NBJ5 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COLGALT1Q8NBJ5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COLGALT1Q8NBJ5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COLGALT1Q8NBJ5 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COLGALT1Q8NBJ5 CYP2D8P-201ENST00000433633 1490 ntBASIC21.33■■□□□ 1.01
COLGALT1Q8NBJ5 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COLGALT1Q8NBJ5 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
COLGALT1Q8NBJ5 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COLGALT1Q8NBJ5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COLGALT1Q8NBJ5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COLGALT1Q8NBJ5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.33■■□□□ 1.01
COLGALT1Q8NBJ5 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COLGALT1Q8NBJ5 ARMC10P1-201ENST00000313754 855 ntBASIC21.33■■□□□ 1.01
COLGALT1Q8NBJ5 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.33■■□□□ 1.01
COLGALT1Q8NBJ5 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COLGALT1Q8NBJ5 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COLGALT1Q8NBJ5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.33■■□□□ 1.01
COLGALT1Q8NBJ5 NAPSB-206ENST00000562112 1266 ntBASIC21.33■■□□□ 1.01
COLGALT1Q8NBJ5 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.33■■□□□ 1.01
COLGALT1Q8NBJ5 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.33■■□□□ 1.01
COLGALT1Q8NBJ5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.33■■□□□ 1.01
COLGALT1Q8NBJ5 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.33■■□□□ 1
COLGALT1Q8NBJ5 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.33■■□□□ 1
COLGALT1Q8NBJ5 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.33■■□□□ 1
COLGALT1Q8NBJ5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.32■■□□□ 1
COLGALT1Q8NBJ5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.32■■□□□ 1
COLGALT1Q8NBJ5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
COLGALT1Q8NBJ5 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.32■■□□□ 1
COLGALT1Q8NBJ5 KRT8P17-201ENST00000453110 1448 ntBASIC21.32■■□□□ 1
COLGALT1Q8NBJ5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.32■■□□□ 1
COLGALT1Q8NBJ5 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
COLGALT1Q8NBJ5 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
COLGALT1Q8NBJ5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.32■■□□□ 1
COLGALT1Q8NBJ5 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COLGALT1Q8NBJ5 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.32■■□□□ 1
COLGALT1Q8NBJ5 AC113347.1-201ENST00000413321 391 ntBASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms