Protein–RNA interactions for Protein: Q8N5G0

SMIM20, Small integral membrane protein 20, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20Q8N5G0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
SMIM20Q8N5G0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM20Q8N5G0 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM20Q8N5G0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC12.38□□□□□ -0.43
SMIM20Q8N5G0 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM20Q8N5G0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
SMIM20Q8N5G0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC12.38□□□□□ -0.43
SMIM20Q8N5G0 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM20Q8N5G0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC12.38□□□□□ -0.43
SMIM20Q8N5G0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC12.38□□□□□ -0.43
SMIM20Q8N5G0 OR6D1P-203ENST00000641209 4860 ntBASIC12.38□□□□□ -0.43
SMIM20Q8N5G0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SMIM20Q8N5G0 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM20Q8N5G0 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
SMIM20Q8N5G0 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM20Q8N5G0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM20Q8N5G0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM20Q8N5G0 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM20Q8N5G0 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM20Q8N5G0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM20Q8N5G0 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SMIM20Q8N5G0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SMIM20Q8N5G0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SMIM20Q8N5G0 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.35□□□□□ -0.43
SMIM20Q8N5G0 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SMIM20Q8N5G0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SMIM20Q8N5G0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SMIM20Q8N5G0 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms