Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
KRT28Q7Z3Y7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC26.95■■□□□ 1.91
KRT28Q7Z3Y7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC26.95■■□□□ 1.91
KRT28Q7Z3Y7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
KRT28Q7Z3Y7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
KRT28Q7Z3Y7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC26.95■■□□□ 1.91
KRT28Q7Z3Y7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC26.95■■□□□ 1.9
KRT28Q7Z3Y7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
KRT28Q7Z3Y7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
KRT28Q7Z3Y7 SLC25A1P2-201ENST00000430693 912 ntBASIC26.95■■□□□ 1.9
KRT28Q7Z3Y7 DUSP5P1-201ENST00000441325 1139 ntBASIC26.95■■□□□ 1.9
KRT28Q7Z3Y7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC26.95■■□□□ 1.9
KRT28Q7Z3Y7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC26.95■■□□□ 1.9
KRT28Q7Z3Y7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
KRT28Q7Z3Y7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC26.95■■□□□ 1.9
KRT28Q7Z3Y7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC26.95■■□□□ 1.9
KRT28Q7Z3Y7 AC010653.2-201ENST00000623505 997 ntBASIC26.95■■□□□ 1.9
KRT28Q7Z3Y7 AL121956.5-201ENST00000625261 221 ntBASIC26.95■■□□□ 1.9
KRT28Q7Z3Y7 HLA-A-209ENST00000638375 975 ntBASIC26.95■■□□□ 1.9
KRT28Q7Z3Y7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC26.95■■□□□ 1.9
KRT28Q7Z3Y7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
KRT28Q7Z3Y7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.9
KRT28Q7Z3Y7 GOLGA6L3-201ENST00000507199 1679 ntBASIC26.95■■□□□ 1.9
KRT28Q7Z3Y7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
KRT28Q7Z3Y7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC26.94■■□□□ 1.9
KRT28Q7Z3Y7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
KRT28Q7Z3Y7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC26.94■■□□□ 1.9
KRT28Q7Z3Y7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC26.94■■□□□ 1.9
KRT28Q7Z3Y7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
KRT28Q7Z3Y7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC26.94■■□□□ 1.9
KRT28Q7Z3Y7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC26.94■■□□□ 1.9
KRT28Q7Z3Y7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC26.94■■□□□ 1.9
KRT28Q7Z3Y7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
KRT28Q7Z3Y7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
KRT28Q7Z3Y7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
KRT28Q7Z3Y7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC26.93■■□□□ 1.9
KRT28Q7Z3Y7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
KRT28Q7Z3Y7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC26.93■■□□□ 1.9
KRT28Q7Z3Y7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC26.93■■□□□ 1.9
KRT28Q7Z3Y7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
KRT28Q7Z3Y7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
KRT28Q7Z3Y7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC26.93■■□□□ 1.9
KRT28Q7Z3Y7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC26.93■■□□□ 1.9
KRT28Q7Z3Y7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC26.93■■□□□ 1.9
KRT28Q7Z3Y7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
KRT28Q7Z3Y7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
KRT28Q7Z3Y7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC26.93■■□□□ 1.9
KRT28Q7Z3Y7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
KRT28Q7Z3Y7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC26.93■■□□□ 1.9
KRT28Q7Z3Y7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
KRT28Q7Z3Y7 AC005229.4-201ENST00000610085 2198 ntBASIC26.92■■□□□ 1.9
KRT28Q7Z3Y7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
KRT28Q7Z3Y7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
KRT28Q7Z3Y7 AC092338.2-201ENST00000568827 1415 ntBASIC26.92■■□□□ 1.9
KRT28Q7Z3Y7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
KRT28Q7Z3Y7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
KRT28Q7Z3Y7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
KRT28Q7Z3Y7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC26.92■■□□□ 1.9
KRT28Q7Z3Y7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
KRT28Q7Z3Y7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC26.92■■□□□ 1.9
KRT28Q7Z3Y7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
KRT28Q7Z3Y7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
KRT28Q7Z3Y7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC26.91■■□□□ 1.9
KRT28Q7Z3Y7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
KRT28Q7Z3Y7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
KRT28Q7Z3Y7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC26.91■■□□□ 1.9
KRT28Q7Z3Y7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC26.91■■□□□ 1.9
KRT28Q7Z3Y7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
KRT28Q7Z3Y7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
KRT28Q7Z3Y7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC26.9■■□□□ 1.9
KRT28Q7Z3Y7 IER3-202ENST00000376377 1350 ntBASIC26.9■■□□□ 1.9
KRT28Q7Z3Y7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC26.9■■□□□ 1.9
KRT28Q7Z3Y7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC26.9■■□□□ 1.9
KRT28Q7Z3Y7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC26.9■■□□□ 1.9
KRT28Q7Z3Y7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC26.9■■□□□ 1.9
KRT28Q7Z3Y7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC26.9■■□□□ 1.9
KRT28Q7Z3Y7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC26.9■■□□□ 1.9
KRT28Q7Z3Y7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC26.9■■□□□ 1.9
KRT28Q7Z3Y7 AL023803.3-201ENST00000615559 522 ntBASIC26.9■■□□□ 1.9
KRT28Q7Z3Y7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC26.9■■□□□ 1.9
KRT28Q7Z3Y7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
KRT28Q7Z3Y7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC26.89■■□□□ 1.9
KRT28Q7Z3Y7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
KRT28Q7Z3Y7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
KRT28Q7Z3Y7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
KRT28Q7Z3Y7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
KRT28Q7Z3Y7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC26.89■■□□□ 1.9
KRT28Q7Z3Y7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
KRT28Q7Z3Y7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
KRT28Q7Z3Y7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC26.89■■□□□ 1.9
KRT28Q7Z3Y7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC26.89■■□□□ 1.9
KRT28Q7Z3Y7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
KRT28Q7Z3Y7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC26.89■■□□□ 1.9
KRT28Q7Z3Y7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC26.89■■□□□ 1.9
KRT28Q7Z3Y7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC26.89■■□□□ 1.9
KRT28Q7Z3Y7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
KRT28Q7Z3Y7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC26.89■■□□□ 1.9
KRT28Q7Z3Y7 AC093458.2-201ENST00000623150 629 ntBASIC26.89■■□□□ 1.9
KRT28Q7Z3Y7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC26.89■■□□□ 1.9
KRT28Q7Z3Y7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms