Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 ALDH7A1-222ENST00000636286 1431 ntTSL 512.14□□□□□ -0.477e-14■■■□□ 15.3
LARP4Q71RC2 PLXNB1-203ENST00000449094 3863 ntTSL 212.07□□□□□ -0.482e-7■■■□□ 15.3
LARP4Q71RC2 ATP6V0B-207ENST00000472505 411 ntTSL 512.03□□□□□ -0.482e-7■■■□□ 15.3
LARP4Q71RC2 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.493e-9■■■□□ 15.3
LARP4Q71RC2 CIAO1-201ENST00000272402 3588 ntTSL 211.71□□□□□ -0.542e-7■■■□□ 15.3
LARP4Q71RC2 NAA10-205ENST00000393712 908 ntTSL 5 BASIC11.65□□□□□ -0.542e-7■■■□□ 15.3
LARP4Q71RC2 ALDH7A1-205ENST00000458249 2037 ntTSL 511.28□□□□□ -0.67e-14■■■□□ 15.3
LARP4Q71RC2 GALNT2-202ENST00000485438 4030 ntTSL 511.16□□□□□ -0.622e-7■■■□□ 15.3
LARP4Q71RC2 ALDH7A1-228ENST00000636886 2321 ntTSL 5 BASIC11.07□□□□□ -0.647e-14■■■□□ 15.3
LARP4Q71RC2 ALDH7A1-233ENST00000637292 1222 ntTSL 510.95□□□□□ -0.667e-14■■■□□ 15.3
LARP4Q71RC2 ALDH7A1-208ENST00000485852 579 ntTSL 210.77□□□□□ -0.697e-14■■■□□ 15.3
LARP4Q71RC2 ALDH7A1-223ENST00000636482 1337 ntTSL 510.56□□□□□ -0.727e-14■■■□□ 15.3
LARP4Q71RC2 ALDH7A1-232ENST00000637272 2554 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.777e-14■■■□□ 15.3
LARP4Q71RC2 ALDH7A1-231ENST00000637206 2466 ntTSL 5 BASIC9.94□□□□□ -0.827e-14■■■□□ 15.3
LARP4Q71RC2 ALDH7A1-216ENST00000635851 2135 ntTSL 59.8□□□□□ -0.847e-14■■■□□ 15.3
LARP4Q71RC2 ALDH7A1-209ENST00000497231 2255 ntTSL 29.25□□□□□ -0.937e-14■■■□□ 15.3
LARP4Q71RC2 ALDH7A1-236ENST00000638008 1865 ntTSL 59.1□□□□□ -0.957e-14■■■□□ 15.3
LARP4Q71RC2 LAD1-205ENST00000503578 582 ntTSL 58.66□□□□□ -1.022e-7■■■□□ 15.3
LARP4Q71RC2 SERPINE2-203ENST00000409840 2569 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.052e-7■■■□□ 15.3
LARP4Q71RC2 ALDH7A1-227ENST00000636879 2501 ntTSL 5 BASIC8.15□□□□□ -1.17e-14■■■□□ 15.3
LARP4Q71RC2 SERPINE2-208ENST00000473202 5989 ntTSL 28.08□□□□□ -1.122e-7■■■□□ 15.3
LARP4Q71RC2 SLC3A2-219ENST00000542793 539 ntTSL 27.9□□□□□ -1.142e-7■■■□□ 15.3
LARP4Q71RC2 CDK1-203ENST00000395284 1913 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.162e-7■■■□□ 15.3
LARP4Q71RC2 TSG101-211ENST00000580814 441 ntTSL 27.35□□□□□ -1.232e-7■■■□□ 15.3
LARP4Q71RC2 ATP6V0B-212ENST00000532072 577 ntTSL 46.55□□□□□ -1.362e-7■■■□□ 15.3
LARP4Q71RC2 TSG101-212ENST00000584526 912 ntTSL 56.34□□□□□ -1.392e-7■■■□□ 15.3
LARP4Q71RC2 ALDH7A1-237ENST00000638010 1755 ntTSL 26.3□□□□□ -1.47e-14■■■□□ 15.3
LARP4Q71RC2 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC6.1□□□□□ -1.432e-7■■■□□ 15.3
LARP4Q71RC2 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.64□□□□□ -1.513e-9■■■□□ 15.3
LARP4Q71RC2 RPA3-207ENST00000483031 641 ntTSL 25.36□□□□□ -1.553e-9■■■□□ 15.3
LARP4Q71RC2 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.9□□□□□ -1.633e-9■■■□□ 15.3
LARP4Q71RC2 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.26□□□□□ -1.732e-7■■■□□ 15.3
LARP4Q71RC2 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.79□□□□□ -1.82e-7■■■□□ 15.3
LARP4Q71RC2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.532e-10■■■□□ 15.3
LARP4Q71RC2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.292e-10■■■□□ 15.3
LARP4Q71RC2 SLC39A7-204ENST00000463972 1410 ntTSL 213.13□□□□□ -0.312e-10■■■□□ 15.3
LARP4Q71RC2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.084e-8■■■□□ 15.3
LARP4Q71RC2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.654e-8■■■□□ 15.3
LARP4Q71RC2 CIDEB-203ENST00000554411 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.874e-8■■■□□ 15.3
LARP4Q71RC2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.21■□□□□ 0.52e-7■■■□□ 15.3
LARP4Q71RC2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.5■□□□□ 0.392e-7■■■□□ 15.3
LARP4Q71RC2 RBCK1-209ENST00000415942 2613 ntTSL 517.38■□□□□ 0.372e-7■■■□□ 15.3
LARP4Q71RC2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.362e-7■■■□□ 15.3
LARP4Q71RC2 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.96■□□□□ 0.152e-7■■■□□ 15.3
LARP4Q71RC2 RBCK1-204ENST00000382214 2752 ntTSL 1 (best)15.64■□□□□ 0.092e-7■■■□□ 15.3
LARP4Q71RC2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.21■□□□□ 0.193e-16■■■□□ 15.2
LARP4Q71RC2 ASGR1-207ENST00000574330 887 ntTSL 514.8□□□□□ -0.043e-16■■■□□ 15.2
LARP4Q71RC2 DCXR-211ENST00000579821 452 ntTSL 312.25□□□□□ -0.455e-8■■■□□ 15.2
LARP4Q71RC2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.412e-14■■■□□ 15.2
LARP4Q71RC2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.66■□□□□ 0.262e-14■■■□□ 15.2
LARP4Q71RC2 HNRNPU-229ENST00000640440 871 ntTSL 313.13□□□□□ -0.312e-8■■■□□ 15.2
LARP4Q71RC2 ARHGDIA-204ENST00000578351 421 ntTSL 411.71□□□□□ -0.531e-6■■■□□ 15.2
LARP4Q71RC2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.71■□□□□ 0.278e-7■■■□□ 15.2
LARP4Q71RC2 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.268e-7■■■□□ 15.2
LARP4Q71RC2 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.138e-7■■■□□ 15.2
LARP4Q71RC2 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.488e-7■■■□□ 15.2
LARP4Q71RC2 PFDN6-205ENST00000395134 805 ntTSL 28.77□□□□□ -1.018e-7■■■□□ 15.2
LARP4Q71RC2 IPO4-220ENST00000561462 1864 ntTSL 216■□□□□ 0.154e-20■■■□□ 15.2
LARP4Q71RC2 IPO4-205ENST00000558233 1015 ntTSL 514.4□□□□□ -0.14e-20■■■□□ 15.2
LARP4Q71RC2 IPO4-218ENST00000561199 3249 ntTSL 212.02□□□□□ -0.494e-20■■■□□ 15.2
LARP4Q71RC2 IPO4-203ENST00000558046 3440 ntTSL 211.91□□□□□ -0.54e-20■■■□□ 15.2
LARP4Q71RC2 IPO4-207ENST00000558780 3540 ntTSL 211.82□□□□□ -0.524e-20■■■□□ 15.2
LARP4Q71RC2 IPO4-214ENST00000560798 3581 ntTSL 211.76□□□□□ -0.534e-20■■■□□ 15.2
LARP4Q71RC2 IPO4-211ENST00000560155 3485 ntTSL 1 (best)11.43□□□□□ -0.584e-20■■■□□ 15.2
LARP4Q71RC2 IPO4-217ENST00000561090 3632 ntTSL 211.05□□□□□ -0.644e-20■■■□□ 15.2
LARP4Q71RC2 IPO4-201ENST00000354464 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.684e-20■■■□□ 15.2
LARP4Q71RC2 IPO4-209ENST00000559588 3537 ntTSL 1 (best)10.46□□□□□ -0.744e-20■■■□□ 15.2
LARP4Q71RC2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.12■□□□□ 0.334e-9■■■□□ 15.2
LARP4Q71RC2 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.04■□□□□ 0.324e-9■■■□□ 15.2
LARP4Q71RC2 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.87■□□□□ 0.294e-9■■■□□ 15.2
LARP4Q71RC2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.164e-9■■■□□ 15.2
LARP4Q71RC2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.164e-9■■■□□ 15.2
LARP4Q71RC2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.86■□□□□ 0.134e-9■■■□□ 15.2
LARP4Q71RC2 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.73□□□□□ -0.053e-7■■■□□ 15.2
LARP4Q71RC2 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.94□□□□□ -0.184e-9■■■□□ 15.2
LARP4Q71RC2 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.9□□□□□ -0.184e-9■■■□□ 15.2
LARP4Q71RC2 MRPL52-205ENST00000432849 411 ntTSL 2 BASIC10.89□□□□□ -0.674e-9■■■□□ 15.2
LARP4Q71RC2 MRPL52-204ENST00000397505 333 ntTSL 5 BASIC10.15□□□□□ -0.784e-9■■■□□ 15.2
LARP4Q71RC2 MRPL52-214ENST00000556654 362 ntTSL 37.14□□□□□ -1.274e-9■■■□□ 15.2
LARP4Q71RC2 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.063e-8■■■□□ 15.2
LARP4Q71RC2 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.47□□□□□ -0.093e-8■■■□□ 15.2
LARP4Q71RC2 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.062e-10■■■□□ 15.2
LARP4Q71RC2 IGSF1-201ENST00000361420 4378 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.822e-10■■■□□ 15.2
LARP4Q71RC2 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.982e-10■■■□□ 15.2
LARP4Q71RC2 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.151e-15■■■□□ 15.2
LARP4Q71RC2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.292e-10■■■□□ 15.2
LARP4Q71RC2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.54■□□□□ 0.242e-10■■■□□ 15.2
LARP4Q71RC2 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.052e-10■■■□□ 15.2
LARP4Q71RC2 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.172e-10■■■□□ 15.2
LARP4Q71RC2 HLA-C-204ENST00000415537 782 nt22.79■■□□□ 1.242e-6■■■□□ 15.2
LARP4Q71RC2 HLA-C-209ENST00000495835 1073 nt22.09■■□□□ 1.132e-6■■■□□ 15.2
LARP4Q71RC2 ATP5I-202ENST00000505852 300 ntTSL 29.11□□□□□ -0.955e-8■■■□□ 15.2
LARP4Q71RC2 ATP5I-201ENST00000304312 365 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.075e-8■■■□□ 15.2
LARP4Q71RC2 POLR2K-201ENST00000353107 998 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.142e-9■■■□□ 15.2
LARP4Q71RC2 POLR2K-202ENST00000519765 1021 ntTSL 56.87□□□□□ -1.312e-9■■■□□ 15.2
LARP4Q71RC2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.13e-13■■■□□ 15.2
LARP4Q71RC2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.053e-13■■■□□ 15.2
LARP4Q71RC2 PPT2-EGFL8-207ENST00000585246 1051 ntAPPRIS ALT2 TSL 219.56■□□□□ 0.723e-13■■■□□ 15.2
LARP4Q71RC2 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.443e-13■■■□□ 15.2
LARP4Q71RC2 PPT2-EGFL8-201ENST00000421600 999 ntAPPRIS ALT2 TSL 517.66■□□□□ 0.423e-13■■■□□ 15.2
Retrieved 100 of 15,922 protein–RNA pairs in 426.2 ms