Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.03■□□□□ -0
CDPF1Q6NVV7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDPF1Q6NVV7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.03■□□□□ -0
CDPF1Q6NVV7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CDPF1Q6NVV7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CDPF1Q6NVV7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CDPF1Q6NVV7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
CDPF1Q6NVV7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CDPF1Q6NVV7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CDPF1Q6NVV7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDPF1Q6NVV7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.03■□□□□ -0
CDPF1Q6NVV7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CDPF1Q6NVV7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CDPF1Q6NVV7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CDPF1Q6NVV7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CDPF1Q6NVV7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDPF1Q6NVV7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDPF1Q6NVV7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDPF1Q6NVV7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDPF1Q6NVV7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDPF1Q6NVV7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC15.02■□□□□ -0
CDPF1Q6NVV7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CDPF1Q6NVV7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
CDPF1Q6NVV7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC15.02■□□□□ -0
CDPF1Q6NVV7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
CDPF1Q6NVV7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.02■□□□□ -0
CDPF1Q6NVV7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDPF1Q6NVV7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDPF1Q6NVV7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CDPF1Q6NVV7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
CDPF1Q6NVV7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC15.02■□□□□ -0
CDPF1Q6NVV7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC15.02■□□□□ -0
CDPF1Q6NVV7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDPF1Q6NVV7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC15.02□□□□□ -0.01
CDPF1Q6NVV7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CDPF1Q6NVV7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CDPF1Q6NVV7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CDPF1Q6NVV7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDPF1Q6NVV7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.02□□□□□ -0.01
CDPF1Q6NVV7 AC068418.2-201ENST00000577309 3703 ntBASIC15.02□□□□□ -0.01
CDPF1Q6NVV7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDPF1Q6NVV7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 AC131274.2-201ENST00000580697 1507 ntBASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDPF1Q6NVV7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CDPF1Q6NVV7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CDPF1Q6NVV7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDPF1Q6NVV7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15□□□□□ -0.01
CDPF1Q6NVV7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15□□□□□ -0.01
CDPF1Q6NVV7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDPF1Q6NVV7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15□□□□□ -0.01
CDPF1Q6NVV7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15□□□□□ -0.01
CDPF1Q6NVV7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15□□□□□ -0.01
CDPF1Q6NVV7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CDPF1Q6NVV7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDPF1Q6NVV7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15□□□□□ -0.01
CDPF1Q6NVV7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDPF1Q6NVV7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CDPF1Q6NVV7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDPF1Q6NVV7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15□□□□□ -0.01
CDPF1Q6NVV7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDPF1Q6NVV7 SUDS3P1-201ENST00000505831 966 ntBASIC15□□□□□ -0.01
CDPF1Q6NVV7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC15□□□□□ -0.01
CDPF1Q6NVV7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CDPF1Q6NVV7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDPF1Q6NVV7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms