Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TRNP1Q6NT89 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.66■□□□□ 0.9
TRNP1Q6NT89 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
TRNP1Q6NT89 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.66■□□□□ 0.9
TRNP1Q6NT89 AP003097.1-201ENST00000530657 1135 ntBASIC20.66■□□□□ 0.9
TRNP1Q6NT89 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRNP1Q6NT89 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.66■□□□□ 0.9
TRNP1Q6NT89 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.66■□□□□ 0.9
TRNP1Q6NT89 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.66■□□□□ 0.9
TRNP1Q6NT89 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.66■□□□□ 0.9
TRNP1Q6NT89 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.66■□□□□ 0.9
TRNP1Q6NT89 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.66■□□□□ 0.9
TRNP1Q6NT89 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRNP1Q6NT89 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TRNP1Q6NT89 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.66■□□□□ 0.9
TRNP1Q6NT89 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRNP1Q6NT89 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRNP1Q6NT89 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.66■□□□□ 0.9
TRNP1Q6NT89 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.66■□□□□ 0.9
TRNP1Q6NT89 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRNP1Q6NT89 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TRNP1Q6NT89 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.66■□□□□ 0.9
TRNP1Q6NT89 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.66■□□□□ 0.9
TRNP1Q6NT89 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
TRNP1Q6NT89 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TRNP1Q6NT89 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRNP1Q6NT89 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRNP1Q6NT89 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TRNP1Q6NT89 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRNP1Q6NT89 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRNP1Q6NT89 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
TRNP1Q6NT89 CD99P1-205ENST00000527459 561 ntBASIC20.65■□□□□ 0.9
TRNP1Q6NT89 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.65■□□□□ 0.9
TRNP1Q6NT89 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.65■□□□□ 0.9
TRNP1Q6NT89 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.65■□□□□ 0.9
TRNP1Q6NT89 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRNP1Q6NT89 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
TRNP1Q6NT89 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TRNP1Q6NT89 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRNP1Q6NT89 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
TRNP1Q6NT89 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRNP1Q6NT89 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRNP1Q6NT89 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRNP1Q6NT89 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRNP1Q6NT89 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRNP1Q6NT89 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TRNP1Q6NT89 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.64■□□□□ 0.89
TRNP1Q6NT89 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRNP1Q6NT89 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.64■□□□□ 0.89
TRNP1Q6NT89 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.64■□□□□ 0.89
TRNP1Q6NT89 AC026366.1-201ENST00000488803 879 ntBASIC20.64■□□□□ 0.89
TRNP1Q6NT89 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.64■□□□□ 0.89
TRNP1Q6NT89 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.64■□□□□ 0.89
TRNP1Q6NT89 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TRNP1Q6NT89 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRNP1Q6NT89 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TRNP1Q6NT89 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
TRNP1Q6NT89 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRNP1Q6NT89 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.63■□□□□ 0.89
TRNP1Q6NT89 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.63■□□□□ 0.89
TRNP1Q6NT89 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRNP1Q6NT89 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TRNP1Q6NT89 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRNP1Q6NT89 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRNP1Q6NT89 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRNP1Q6NT89 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TRNP1Q6NT89 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRNP1Q6NT89 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TRNP1Q6NT89 POM121L13P-201ENST00000422362 380 ntBASIC20.63■□□□□ 0.89
TRNP1Q6NT89 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.63■□□□□ 0.89
TRNP1Q6NT89 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.63■□□□□ 0.89
TRNP1Q6NT89 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRNP1Q6NT89 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRNP1Q6NT89 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TRNP1Q6NT89 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRNP1Q6NT89 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRNP1Q6NT89 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.63■□□□□ 0.89
TRNP1Q6NT89 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRNP1Q6NT89 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRNP1Q6NT89 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
TRNP1Q6NT89 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.62■□□□□ 0.89
TRNP1Q6NT89 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRNP1Q6NT89 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.62■□□□□ 0.89
TRNP1Q6NT89 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
TRNP1Q6NT89 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRNP1Q6NT89 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRNP1Q6NT89 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRNP1Q6NT89 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRNP1Q6NT89 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRNP1Q6NT89 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.62■□□□□ 0.89
TRNP1Q6NT89 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.62■□□□□ 0.89
TRNP1Q6NT89 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.62■□□□□ 0.89
TRNP1Q6NT89 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.62■□□□□ 0.89
TRNP1Q6NT89 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRNP1Q6NT89 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRNP1Q6NT89 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRNP1Q6NT89 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
TRNP1Q6NT89 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TRNP1Q6NT89 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRNP1Q6NT89 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms