Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.5■□□□□ 0.39
HIST3H3Q16695 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.5■□□□□ 0.39
HIST3H3Q16695 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.5■□□□□ 0.39
HIST3H3Q16695 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
HIST3H3Q16695 AC006557.6-201ENST00000623071 864 ntBASIC17.5■□□□□ 0.39
HIST3H3Q16695 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST3H3Q16695 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST3H3Q16695 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HIST3H3Q16695 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.5■□□□□ 0.39
HIST3H3Q16695 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST3H3Q16695 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HIST3H3Q16695 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HIST3H3Q16695 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST3H3Q16695 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.5■□□□□ 0.39
HIST3H3Q16695 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST3H3Q16695 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H3Q16695 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H3Q16695 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HIST3H3Q16695 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.49■□□□□ 0.39
HIST3H3Q16695 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H3Q16695 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
HIST3H3Q16695 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H3Q16695 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H3Q16695 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H3Q16695 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H3Q16695 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.49■□□□□ 0.39
HIST3H3Q16695 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H3Q16695 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.49■□□□□ 0.39
HIST3H3Q16695 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.49■□□□□ 0.39
HIST3H3Q16695 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.49■□□□□ 0.39
HIST3H3Q16695 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.49■□□□□ 0.39
HIST3H3Q16695 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.49■□□□□ 0.39
HIST3H3Q16695 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H3Q16695 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H3Q16695 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.49■□□□□ 0.39
HIST3H3Q16695 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.49■□□□□ 0.39
HIST3H3Q16695 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H3Q16695 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.49■□□□□ 0.39
HIST3H3Q16695 TFP1-202ENST00000475455 1573 ntBASIC17.49■□□□□ 0.39
HIST3H3Q16695 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H3Q16695 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.48■□□□□ 0.39
HIST3H3Q16695 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HIST3H3Q16695 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.48■□□□□ 0.39
HIST3H3Q16695 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H3Q16695 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.48■□□□□ 0.39
HIST3H3Q16695 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.48■□□□□ 0.39
HIST3H3Q16695 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H3Q16695 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H3Q16695 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H3Q16695 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H3Q16695 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.48■□□□□ 0.39
HIST3H3Q16695 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.48■□□□□ 0.39
HIST3H3Q16695 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.48■□□□□ 0.39
HIST3H3Q16695 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H3Q16695 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.48■□□□□ 0.39
HIST3H3Q16695 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.48■□□□□ 0.39
HIST3H3Q16695 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H3Q16695 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
HIST3H3Q16695 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.48■□□□□ 0.39
HIST3H3Q16695 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.48■□□□□ 0.39
HIST3H3Q16695 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H3Q16695 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H3Q16695 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H3Q16695 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H3Q16695 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.48■□□□□ 0.39
HIST3H3Q16695 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H3Q16695 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.48■□□□□ 0.39
HIST3H3Q16695 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
HIST3H3Q16695 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.48■□□□□ 0.39
HIST3H3Q16695 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H3Q16695 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H3Q16695 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H3Q16695 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H3Q16695 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.47■□□□□ 0.39
HIST3H3Q16695 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H3Q16695 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H3Q16695 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
HIST3H3Q16695 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H3Q16695 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.47■□□□□ 0.39
HIST3H3Q16695 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.47■□□□□ 0.39
HIST3H3Q16695 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.47■□□□□ 0.39
HIST3H3Q16695 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.47■□□□□ 0.39
HIST3H3Q16695 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.47■□□□□ 0.39
HIST3H3Q16695 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H3Q16695 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H3Q16695 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H3Q16695 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H3Q16695 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.47■□□□□ 0.39
HIST3H3Q16695 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.47■□□□□ 0.39
HIST3H3Q16695 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H3Q16695 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.47■□□□□ 0.39
HIST3H3Q16695 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H3Q16695 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H3Q16695 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H3Q16695 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HIST3H3Q16695 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HIST3H3Q16695 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.46■□□□□ 0.39
HIST3H3Q16695 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.46■□□□□ 0.39
HIST3H3Q16695 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HIST3H3Q16695 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms