Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
SNRPFP62306 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SNRPFP62306 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SNRPFP62306 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.57■■□□□ 1.04
SNRPFP62306 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SNRPFP62306 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.57■■□□□ 1.04
SNRPFP62306 KRT17P3-201ENST00000420566 1262 ntBASIC21.57■■□□□ 1.04
SNRPFP62306 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.57■■□□□ 1.04
SNRPFP62306 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.57■■□□□ 1.04
SNRPFP62306 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.57■■□□□ 1.04
SNRPFP62306 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
SNRPFP62306 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
SNRPFP62306 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.57■■□□□ 1.04
SNRPFP62306 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SNRPFP62306 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.57■■□□□ 1.04
SNRPFP62306 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.57■■□□□ 1.04
SNRPFP62306 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNRPFP62306 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SNRPFP62306 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNRPFP62306 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNRPFP62306 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNRPFP62306 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SNRPFP62306 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SNRPFP62306 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.57■■□□□ 1.04
SNRPFP62306 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNRPFP62306 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNRPFP62306 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
SNRPFP62306 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.56■■□□□ 1.04
SNRPFP62306 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.56■■□□□ 1.04
SNRPFP62306 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SNRPFP62306 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SNRPFP62306 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNRPFP62306 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.56■■□□□ 1.04
SNRPFP62306 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SNRPFP62306 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNRPFP62306 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNRPFP62306 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNRPFP62306 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.56■■□□□ 1.04
SNRPFP62306 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNRPFP62306 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNRPFP62306 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.56■■□□□ 1.04
SNRPFP62306 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SNRPFP62306 CD99P1-205ENST00000527459 561 ntBASIC21.56■■□□□ 1.04
SNRPFP62306 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.56■■□□□ 1.04
SNRPFP62306 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNRPFP62306 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SNRPFP62306 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNRPFP62306 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.56■■□□□ 1.04
SNRPFP62306 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SNRPFP62306 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.56■■□□□ 1.04
SNRPFP62306 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SNRPFP62306 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SNRPFP62306 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SNRPFP62306 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNRPFP62306 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SNRPFP62306 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNRPFP62306 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNRPFP62306 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNRPFP62306 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNRPFP62306 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SNRPFP62306 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.55■■□□□ 1.04
SNRPFP62306 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.55■■□□□ 1.04
SNRPFP62306 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNRPFP62306 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SNRPFP62306 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNRPFP62306 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SNRPFP62306 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.54■■□□□ 1.04
SNRPFP62306 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
SNRPFP62306 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNRPFP62306 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.54■■□□□ 1.04
SNRPFP62306 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNRPFP62306 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNRPFP62306 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SNRPFP62306 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNRPFP62306 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNRPFP62306 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.54■■□□□ 1.04
SNRPFP62306 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SNRPFP62306 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SNRPFP62306 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SNRPFP62306 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNRPFP62306 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNRPFP62306 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.53■■□□□ 1.04
SNRPFP62306 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SNRPFP62306 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SNRPFP62306 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SNRPFP62306 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
SNRPFP62306 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.53■■□□□ 1.04
SNRPFP62306 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.53■■□□□ 1.04
SNRPFP62306 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SNRPFP62306 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.53■■□□□ 1.04
SNRPFP62306 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.53■■□□□ 1.04
SNRPFP62306 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.53■■□□□ 1.04
SNRPFP62306 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.53■■□□□ 1.04
SNRPFP62306 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNRPFP62306 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.53■■□□□ 1.04
SNRPFP62306 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNRPFP62306 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SNRPFP62306 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.53■■□□□ 1.04
SNRPFP62306 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SNRPFP62306 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms