Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 AF201337.1-201ENST00000520239 748 ntBASIC20.43■□□□□ 0.86
EIF3EP60228 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.43■□□□□ 0.86
EIF3EP60228 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
EIF3EP60228 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EIF3EP60228 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EIF3EP60228 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
EIF3EP60228 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.43■□□□□ 0.86
EIF3EP60228 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EIF3EP60228 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.42■□□□□ 0.86
EIF3EP60228 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.42■□□□□ 0.86
EIF3EP60228 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EIF3EP60228 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EIF3EP60228 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EIF3EP60228 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EIF3EP60228 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
EIF3EP60228 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EIF3EP60228 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EIF3EP60228 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
EIF3EP60228 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EIF3EP60228 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EIF3EP60228 MIR663A-201ENST00000385250 93 ntBASIC20.42■□□□□ 0.86
EIF3EP60228 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
EIF3EP60228 AC026185.1-201ENST00000445748 174 ntBASIC20.42■□□□□ 0.86
EIF3EP60228 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EIF3EP60228 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.42■□□□□ 0.86
EIF3EP60228 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.42■□□□□ 0.86
EIF3EP60228 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EIF3EP60228 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EIF3EP60228 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
EIF3EP60228 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EIF3EP60228 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
EIF3EP60228 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.42■□□□□ 0.86
EIF3EP60228 PHGDH-210ENST00000641115 1638 ntBASIC20.42■□□□□ 0.86
EIF3EP60228 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EIF3EP60228 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EIF3EP60228 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
EIF3EP60228 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.41■□□□□ 0.86
EIF3EP60228 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.41■□□□□ 0.86
EIF3EP60228 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EIF3EP60228 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
EIF3EP60228 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EIF3EP60228 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EIF3EP60228 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
EIF3EP60228 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.41■□□□□ 0.86
EIF3EP60228 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
EIF3EP60228 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.41■□□□□ 0.86
EIF3EP60228 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
EIF3EP60228 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
EIF3EP60228 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
EIF3EP60228 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
EIF3EP60228 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
EIF3EP60228 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
EIF3EP60228 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
EIF3EP60228 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
EIF3EP60228 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
EIF3EP60228 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EIF3EP60228 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
EIF3EP60228 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EIF3EP60228 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EIF3EP60228 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
EIF3EP60228 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
EIF3EP60228 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EIF3EP60228 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.4■□□□□ 0.86
EIF3EP60228 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EIF3EP60228 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.4■□□□□ 0.86
EIF3EP60228 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.4■□□□□ 0.86
EIF3EP60228 GPX1P1-201ENST00000388829 606 ntBASIC20.4■□□□□ 0.86
EIF3EP60228 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EIF3EP60228 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EIF3EP60228 BX276092.2-201ENST00000417668 665 ntBASIC20.4■□□□□ 0.86
EIF3EP60228 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
EIF3EP60228 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
EIF3EP60228 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EIF3EP60228 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.4■□□□□ 0.86
EIF3EP60228 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
EIF3EP60228 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
EIF3EP60228 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
EIF3EP60228 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.4■□□□□ 0.86
EIF3EP60228 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
EIF3EP60228 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EIF3EP60228 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.4■□□□□ 0.86
EIF3EP60228 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.4■□□□□ 0.86
EIF3EP60228 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EIF3EP60228 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
EIF3EP60228 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EIF3EP60228 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.39■□□□□ 0.86
EIF3EP60228 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
EIF3EP60228 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
EIF3EP60228 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.39■□□□□ 0.86
EIF3EP60228 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.39■□□□□ 0.85
EIF3EP60228 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.39■□□□□ 0.85
EIF3EP60228 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
EIF3EP60228 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
EIF3EP60228 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
EIF3EP60228 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
EIF3EP60228 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.39■□□□□ 0.85
EIF3EP60228 RAP2CP1-201ENST00000605103 478 ntBASIC20.39■□□□□ 0.85
EIF3EP60228 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
EIF3EP60228 AC093484.2-201ENST00000580996 2166 ntBASIC20.39■□□□□ 0.85
EIF3EP60228 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms