Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.02■□□□□ 0.8
WNT3AP56704 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.02■□□□□ 0.8
WNT3AP56704 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.02■□□□□ 0.8
WNT3AP56704 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
WNT3AP56704 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
WNT3AP56704 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.02■□□□□ 0.8
WNT3AP56704 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
WNT3AP56704 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
WNT3AP56704 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
WNT3AP56704 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
WNT3AP56704 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.02■□□□□ 0.79
WNT3AP56704 AC124283.5-201ENST00000624661 1809 ntBASIC20.02■□□□□ 0.79
WNT3AP56704 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
WNT3AP56704 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
WNT3AP56704 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
WNT3AP56704 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.01■□□□□ 0.79
WNT3AP56704 AC018553.1-201ENST00000616682 1458 ntBASIC20.01■□□□□ 0.79
WNT3AP56704 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.01■□□□□ 0.79
WNT3AP56704 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
WNT3AP56704 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
WNT3AP56704 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.01■□□□□ 0.79
WNT3AP56704 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
WNT3AP56704 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.01■□□□□ 0.79
WNT3AP56704 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.01■□□□□ 0.79
WNT3AP56704 RPS2P52-201ENST00000469610 820 ntBASIC20.01■□□□□ 0.79
WNT3AP56704 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.01■□□□□ 0.79
WNT3AP56704 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
WNT3AP56704 SOX15-203ENST00000570788 1093 ntBASIC20.01■□□□□ 0.79
WNT3AP56704 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
WNT3AP56704 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
WNT3AP56704 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.01■□□□□ 0.79
WNT3AP56704 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
WNT3AP56704 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
WNT3AP56704 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
WNT3AP56704 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.01■□□□□ 0.79
WNT3AP56704 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
WNT3AP56704 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
WNT3AP56704 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
WNT3AP56704 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
WNT3AP56704 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
WNT3AP56704 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
WNT3AP56704 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20■□□□□ 0.79
WNT3AP56704 AC116351.2-201ENST00000606540 1585 ntBASIC20■□□□□ 0.79
WNT3AP56704 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
WNT3AP56704 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20■□□□□ 0.79
WNT3AP56704 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
WNT3AP56704 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
WNT3AP56704 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20■□□□□ 0.79
WNT3AP56704 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
WNT3AP56704 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
WNT3AP56704 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20■□□□□ 0.79
WNT3AP56704 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20■□□□□ 0.79
WNT3AP56704 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20■□□□□ 0.79
WNT3AP56704 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
WNT3AP56704 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20■□□□□ 0.79
WNT3AP56704 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
WNT3AP56704 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
WNT3AP56704 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
WNT3AP56704 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
WNT3AP56704 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
WNT3AP56704 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
WNT3AP56704 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20■□□□□ 0.79
WNT3AP56704 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
WNT3AP56704 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
WNT3AP56704 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
WNT3AP56704 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20■□□□□ 0.79
WNT3AP56704 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20■□□□□ 0.79
WNT3AP56704 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.99■□□□□ 0.79
WNT3AP56704 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.99■□□□□ 0.79
WNT3AP56704 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.99■□□□□ 0.79
WNT3AP56704 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.99■□□□□ 0.79
WNT3AP56704 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.99■□□□□ 0.79
WNT3AP56704 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
WNT3AP56704 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
WNT3AP56704 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
WNT3AP56704 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.99■□□□□ 0.79
WNT3AP56704 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
WNT3AP56704 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.99■□□□□ 0.79
WNT3AP56704 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
WNT3AP56704 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.99■□□□□ 0.79
WNT3AP56704 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
WNT3AP56704 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.99■□□□□ 0.79
WNT3AP56704 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
WNT3AP56704 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.99■□□□□ 0.79
WNT3AP56704 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
WNT3AP56704 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.99■□□□□ 0.79
WNT3AP56704 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.99■□□□□ 0.79
WNT3AP56704 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
WNT3AP56704 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
WNT3AP56704 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
WNT3AP56704 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
WNT3AP56704 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.98■□□□□ 0.79
WNT3AP56704 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
WNT3AP56704 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.98■□□□□ 0.79
WNT3AP56704 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
WNT3AP56704 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
WNT3AP56704 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
WNT3AP56704 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.98■□□□□ 0.79
WNT3AP56704 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
WNT3AP56704 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms