Protein–RNA interactions for Protein: P55822

SH3BGR, SH3 domain-binding glutamic acid-rich protein, humanhuman

Predicted RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BGRP55822 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SH3BGRP55822 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
SH3BGRP55822 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3BGRP55822 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
SH3BGRP55822 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3BGRP55822 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3BGRP55822 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SH3BGRP55822 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.82■□□□□ 0.6
SH3BGRP55822 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3BGRP55822 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3BGRP55822 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3BGRP55822 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3BGRP55822 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
SH3BGRP55822 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3BGRP55822 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3BGRP55822 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.81■□□□□ 0.6
SH3BGRP55822 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.81■□□□□ 0.6
SH3BGRP55822 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3BGRP55822 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3BGRP55822 PCDHB18P-201ENST00000524813 2368 ntBASIC18.81■□□□□ 0.6
SH3BGRP55822 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3BGRP55822 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SH3BGRP55822 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SH3BGRP55822 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SH3BGRP55822 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SH3BGRP55822 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SH3BGRP55822 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.81■□□□□ 0.6
SH3BGRP55822 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SH3BGRP55822 TERF1P2-201ENST00000583350 1212 ntBASIC18.81■□□□□ 0.6
SH3BGRP55822 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SH3BGRP55822 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.81■□□□□ 0.6
SH3BGRP55822 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SH3BGRP55822 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3BGRP55822 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SH3BGRP55822 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3BGRP55822 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3BGRP55822 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SH3BGRP55822 AP006587.3-201ENST00000525742 1516 ntBASIC18.8■□□□□ 0.6
SH3BGRP55822 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3BGRP55822 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3BGRP55822 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SH3BGRP55822 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.8■□□□□ 0.6
SH3BGRP55822 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3BGRP55822 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.8■□□□□ 0.6
SH3BGRP55822 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SH3BGRP55822 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3BGRP55822 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
SH3BGRP55822 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3BGRP55822 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3BGRP55822 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SH3BGRP55822 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SH3BGRP55822 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SH3BGRP55822 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.8■□□□□ 0.6
SH3BGRP55822 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.8■□□□□ 0.6
SH3BGRP55822 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.8■□□□□ 0.6
SH3BGRP55822 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.8■□□□□ 0.6
SH3BGRP55822 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.8■□□□□ 0.6
SH3BGRP55822 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3BGRP55822 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3BGRP55822 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.8■□□□□ 0.6
SH3BGRP55822 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3BGRP55822 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SH3BGRP55822 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.8■□□□□ 0.6
SH3BGRP55822 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3BGRP55822 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3BGRP55822 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SH3BGRP55822 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.8■□□□□ 0.6
SH3BGRP55822 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SH3BGRP55822 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SH3BGRP55822 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.79■□□□□ 0.6
SH3BGRP55822 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SH3BGRP55822 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3BGRP55822 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3BGRP55822 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SH3BGRP55822 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SH3BGRP55822 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.79■□□□□ 0.6
SH3BGRP55822 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.79■□□□□ 0.6
SH3BGRP55822 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.79■□□□□ 0.6
SH3BGRP55822 CCDC92B-201ENST00000575506 885 ntBASIC18.79■□□□□ 0.6
SH3BGRP55822 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SH3BGRP55822 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.79■□□□□ 0.6
SH3BGRP55822 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.79■□□□□ 0.6
SH3BGRP55822 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SH3BGRP55822 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3BGRP55822 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
SH3BGRP55822 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3BGRP55822 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.79■□□□□ 0.6
SH3BGRP55822 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3BGRP55822 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3BGRP55822 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.78■□□□□ 0.6
SH3BGRP55822 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SH3BGRP55822 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SH3BGRP55822 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SH3BGRP55822 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH3BGRP55822 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH3BGRP55822 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.78■□□□□ 0.6
SH3BGRP55822 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.78■□□□□ 0.6
SH3BGRP55822 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH3BGRP55822 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH3BGRP55822 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms