Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGCLP35914 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGCLP35914 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGCLP35914 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGCLP35914 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.75■□□□□ 0.75
HMGCLP35914 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.75■□□□□ 0.75
HMGCLP35914 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGCLP35914 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGCLP35914 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
HMGCLP35914 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCLP35914 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.74■□□□□ 0.75
HMGCLP35914 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCLP35914 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCLP35914 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
HMGCLP35914 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.74■□□□□ 0.75
HMGCLP35914 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.74■□□□□ 0.75
HMGCLP35914 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCLP35914 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCLP35914 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCLP35914 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCLP35914 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCLP35914 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.74■□□□□ 0.75
HMGCLP35914 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.74■□□□□ 0.75
HMGCLP35914 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
HMGCLP35914 AC069544.1-201ENST00000609399 999 ntBASIC19.74■□□□□ 0.75
HMGCLP35914 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCLP35914 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCLP35914 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.74■□□□□ 0.75
HMGCLP35914 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HMGCLP35914 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCLP35914 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HMGCLP35914 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCLP35914 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCLP35914 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCLP35914 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.73■□□□□ 0.75
HMGCLP35914 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCLP35914 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCLP35914 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCLP35914 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCLP35914 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCLP35914 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCLP35914 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCLP35914 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.73■□□□□ 0.75
HMGCLP35914 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.73■□□□□ 0.75
HMGCLP35914 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCLP35914 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.73■□□□□ 0.75
HMGCLP35914 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HMGCLP35914 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCLP35914 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCLP35914 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCLP35914 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.73■□□□□ 0.75
HMGCLP35914 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
HMGCLP35914 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HMGCLP35914 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.73■□□□□ 0.75
HMGCLP35914 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.73■□□□□ 0.75
HMGCLP35914 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.73■□□□□ 0.75
HMGCLP35914 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.73■□□□□ 0.75
HMGCLP35914 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.73■□□□□ 0.75
HMGCLP35914 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCLP35914 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.73■□□□□ 0.75
HMGCLP35914 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.73■□□□□ 0.75
HMGCLP35914 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCLP35914 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
HMGCLP35914 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCLP35914 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HMGCLP35914 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCLP35914 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCLP35914 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.73■□□□□ 0.75
HMGCLP35914 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.73■□□□□ 0.75
HMGCLP35914 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCLP35914 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCLP35914 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCLP35914 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HMGCLP35914 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.73■□□□□ 0.75
HMGCLP35914 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCLP35914 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.72■□□□□ 0.75
HMGCLP35914 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCLP35914 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCLP35914 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCLP35914 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.72■□□□□ 0.75
HMGCLP35914 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCLP35914 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCLP35914 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HMGCLP35914 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCLP35914 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCLP35914 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCLP35914 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCLP35914 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCLP35914 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.72■□□□□ 0.75
HMGCLP35914 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.72■□□□□ 0.75
HMGCLP35914 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCLP35914 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.72■□□□□ 0.75
HMGCLP35914 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCLP35914 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.72■□□□□ 0.75
HMGCLP35914 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.72■□□□□ 0.75
HMGCLP35914 AC006058.3-201ENST00000606217 1069 ntBASIC19.72■□□□□ 0.75
HMGCLP35914 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCLP35914 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCLP35914 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCLP35914 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms