Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HTR1EP28566 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
HTR1EP28566 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HTR1EP28566 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HTR1EP28566 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
HTR1EP28566 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HTR1EP28566 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HTR1EP28566 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HTR1EP28566 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
HTR1EP28566 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HTR1EP28566 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
HTR1EP28566 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.92■□□□□ 0.62
HTR1EP28566 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HTR1EP28566 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HTR1EP28566 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HTR1EP28566 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.92■□□□□ 0.62
HTR1EP28566 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HTR1EP28566 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HTR1EP28566 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HTR1EP28566 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HTR1EP28566 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HTR1EP28566 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.91■□□□□ 0.62
HTR1EP28566 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HTR1EP28566 PRORSD1P-201ENST00000295112 541 ntBASIC18.91■□□□□ 0.62
HTR1EP28566 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
HTR1EP28566 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HTR1EP28566 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.91■□□□□ 0.62
HTR1EP28566 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
HTR1EP28566 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HTR1EP28566 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
HTR1EP28566 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HTR1EP28566 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HTR1EP28566 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.91■□□□□ 0.62
HTR1EP28566 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HTR1EP28566 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.91■□□□□ 0.62
HTR1EP28566 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HTR1EP28566 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HTR1EP28566 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.91■□□□□ 0.62
HTR1EP28566 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.91■□□□□ 0.62
HTR1EP28566 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.91■□□□□ 0.62
HTR1EP28566 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HTR1EP28566 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HTR1EP28566 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.9■□□□□ 0.62
HTR1EP28566 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HTR1EP28566 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.9■□□□□ 0.62
HTR1EP28566 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HTR1EP28566 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HTR1EP28566 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HTR1EP28566 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
HTR1EP28566 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HTR1EP28566 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.9■□□□□ 0.62
HTR1EP28566 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.9■□□□□ 0.62
HTR1EP28566 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HTR1EP28566 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HTR1EP28566 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.9■□□□□ 0.62
HTR1EP28566 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
HTR1EP28566 AC091799.1-201ENST00000422823 811 ntBASIC18.9■□□□□ 0.62
HTR1EP28566 FAM21FP-204ENST00000608637 956 ntBASIC18.9■□□□□ 0.62
HTR1EP28566 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HTR1EP28566 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HTR1EP28566 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HTR1EP28566 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HTR1EP28566 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HTR1EP28566 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.9■□□□□ 0.62
HTR1EP28566 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.9■□□□□ 0.62
HTR1EP28566 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HTR1EP28566 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.9■□□□□ 0.62
HTR1EP28566 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HTR1EP28566 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.9■□□□□ 0.62
HTR1EP28566 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HTR1EP28566 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
HTR1EP28566 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
HTR1EP28566 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HTR1EP28566 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.89■□□□□ 0.62
HTR1EP28566 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.89■□□□□ 0.62
HTR1EP28566 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.62
HTR1EP28566 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.89■□□□□ 0.61
HTR1EP28566 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HTR1EP28566 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HTR1EP28566 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HTR1EP28566 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HTR1EP28566 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HTR1EP28566 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.89■□□□□ 0.61
HTR1EP28566 AC007322.3-201ENST00000426526 701 ntBASIC18.89■□□□□ 0.61
HTR1EP28566 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HTR1EP28566 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.89■□□□□ 0.61
HTR1EP28566 AP006294.2-201ENST00000641667 209 ntBASIC18.89■□□□□ 0.61
HTR1EP28566 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
HTR1EP28566 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HTR1EP28566 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HTR1EP28566 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HTR1EP28566 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.89■□□□□ 0.61
HTR1EP28566 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.89■□□□□ 0.61
HTR1EP28566 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HTR1EP28566 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HTR1EP28566 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.88■□□□□ 0.61
HTR1EP28566 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTR1EP28566 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTR1EP28566 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTR1EP28566 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms