Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
APOA4P06727 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
APOA4P06727 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
APOA4P06727 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
APOA4P06727 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.83■□□□□ 0.77
APOA4P06727 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
APOA4P06727 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
APOA4P06727 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
APOA4P06727 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
APOA4P06727 C2orf69P4-201ENST00000565394 541 ntBASIC19.83■□□□□ 0.77
APOA4P06727 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
APOA4P06727 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.83■□□□□ 0.77
APOA4P06727 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.83■□□□□ 0.77
APOA4P06727 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.83■□□□□ 0.77
APOA4P06727 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
APOA4P06727 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.83■□□□□ 0.76
APOA4P06727 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
APOA4P06727 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.83■□□□□ 0.76
APOA4P06727 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.83■□□□□ 0.76
APOA4P06727 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
APOA4P06727 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
APOA4P06727 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
APOA4P06727 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.83■□□□□ 0.76
APOA4P06727 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.83■□□□□ 0.76
APOA4P06727 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
APOA4P06727 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
APOA4P06727 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
APOA4P06727 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
APOA4P06727 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.82■□□□□ 0.76
APOA4P06727 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
APOA4P06727 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
APOA4P06727 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.82■□□□□ 0.76
APOA4P06727 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
APOA4P06727 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
APOA4P06727 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
APOA4P06727 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.82■□□□□ 0.76
APOA4P06727 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.82■□□□□ 0.76
APOA4P06727 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.82■□□□□ 0.76
APOA4P06727 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
APOA4P06727 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
APOA4P06727 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
APOA4P06727 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
APOA4P06727 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
APOA4P06727 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
APOA4P06727 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.81■□□□□ 0.76
APOA4P06727 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
APOA4P06727 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
APOA4P06727 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.81■□□□□ 0.76
APOA4P06727 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
APOA4P06727 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.81■□□□□ 0.76
APOA4P06727 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
APOA4P06727 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
APOA4P06727 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.81■□□□□ 0.76
APOA4P06727 AC104771.1-201ENST00000603335 964 ntBASIC19.81■□□□□ 0.76
APOA4P06727 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
APOA4P06727 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.81■□□□□ 0.76
APOA4P06727 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.81■□□□□ 0.76
APOA4P06727 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.81■□□□□ 0.76
APOA4P06727 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
APOA4P06727 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
APOA4P06727 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
APOA4P06727 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
APOA4P06727 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
APOA4P06727 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
APOA4P06727 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
APOA4P06727 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
APOA4P06727 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
APOA4P06727 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
APOA4P06727 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
APOA4P06727 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
APOA4P06727 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
APOA4P06727 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.8■□□□□ 0.76
APOA4P06727 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.8■□□□□ 0.76
APOA4P06727 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.8■□□□□ 0.76
APOA4P06727 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.8■□□□□ 0.76
APOA4P06727 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
APOA4P06727 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
APOA4P06727 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.8■□□□□ 0.76
APOA4P06727 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
APOA4P06727 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
APOA4P06727 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
APOA4P06727 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
APOA4P06727 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
APOA4P06727 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
APOA4P06727 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
APOA4P06727 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.8■□□□□ 0.76
APOA4P06727 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
APOA4P06727 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.8■□□□□ 0.76
APOA4P06727 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.79■□□□□ 0.76
APOA4P06727 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.79■□□□□ 0.76
APOA4P06727 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
APOA4P06727 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
APOA4P06727 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
APOA4P06727 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.79■□□□□ 0.76
APOA4P06727 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
APOA4P06727 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
APOA4P06727 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.79■□□□□ 0.76
APOA4P06727 DUSP5P2-201ENST00000426873 1033 ntBASIC19.79■□□□□ 0.76
APOA4P06727 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
APOA4P06727 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms