Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.62■□□□□ 0.89
LMNAP02545 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LMNAP02545 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LMNAP02545 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LMNAP02545 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LMNAP02545 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LMNAP02545 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LMNAP02545 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LMNAP02545 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
LMNAP02545 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.61■□□□□ 0.89
LMNAP02545 AL020996.1-203ENST00000536896 2307 ntBASIC20.61■□□□□ 0.89
LMNAP02545 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LMNAP02545 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
LMNAP02545 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.61■□□□□ 0.89
LMNAP02545 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LMNAP02545 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.61■□□□□ 0.89
LMNAP02545 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
LMNAP02545 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LMNAP02545 AC005521.1-201ENST00000393351 872 ntBASIC20.61■□□□□ 0.89
LMNAP02545 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.61■□□□□ 0.89
LMNAP02545 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.61■□□□□ 0.89
LMNAP02545 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.61■□□□□ 0.89
LMNAP02545 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.61■□□□□ 0.89
LMNAP02545 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.61■□□□□ 0.89
LMNAP02545 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.61■□□□□ 0.89
LMNAP02545 MIR6786-201ENST00000616843 113 ntBASIC20.61■□□□□ 0.89
LMNAP02545 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.61■□□□□ 0.89
LMNAP02545 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
LMNAP02545 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.61■□□□□ 0.89
LMNAP02545 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LMNAP02545 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LMNAP02545 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LMNAP02545 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.61■□□□□ 0.89
LMNAP02545 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
LMNAP02545 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LMNAP02545 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LMNAP02545 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LMNAP02545 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.6■□□□□ 0.89
LMNAP02545 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.6■□□□□ 0.89
LMNAP02545 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
LMNAP02545 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LMNAP02545 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LMNAP02545 AL355355.2-201ENST00000442321 338 ntBASIC20.6■□□□□ 0.89
LMNAP02545 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.6■□□□□ 0.89
LMNAP02545 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.6■□□□□ 0.89
LMNAP02545 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.6■□□□□ 0.89
LMNAP02545 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LMNAP02545 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LMNAP02545 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LMNAP02545 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LMNAP02545 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LMNAP02545 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
LMNAP02545 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LMNAP02545 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.59■□□□□ 0.89
LMNAP02545 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LMNAP02545 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
LMNAP02545 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LMNAP02545 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.59■□□□□ 0.89
LMNAP02545 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.59■□□□□ 0.89
LMNAP02545 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LMNAP02545 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
LMNAP02545 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LMNAP02545 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LMNAP02545 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LMNAP02545 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.59■□□□□ 0.89
LMNAP02545 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LMNAP02545 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LMNAP02545 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
LMNAP02545 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LMNAP02545 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LMNAP02545 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
LMNAP02545 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
LMNAP02545 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.58■□□□□ 0.89
LMNAP02545 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LMNAP02545 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LMNAP02545 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LMNAP02545 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.58■□□□□ 0.89
LMNAP02545 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LMNAP02545 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LMNAP02545 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.58■□□□□ 0.88
LMNAP02545 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LMNAP02545 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
LMNAP02545 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
LMNAP02545 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LMNAP02545 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMNAP02545 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.57■□□□□ 0.88
LMNAP02545 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.57■□□□□ 0.88
LMNAP02545 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.57■□□□□ 0.88
LMNAP02545 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMNAP02545 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMNAP02545 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
LMNAP02545 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
LMNAP02545 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.57■□□□□ 0.88
LMNAP02545 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.57■□□□□ 0.88
LMNAP02545 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
LMNAP02545 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.57■□□□□ 0.88
LMNAP02545 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMNAP02545 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.57■□□□□ 0.88
LMNAP02545 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LMNAP02545 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms