Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DHFRP00374 AC136469.2-201ENST00000623944 1028 ntBASIC17.12■□□□□ 0.33
DHFRP00374 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
DHFRP00374 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.12■□□□□ 0.33
DHFRP00374 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.12■□□□□ 0.33
DHFRP00374 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.12■□□□□ 0.33
DHFRP00374 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DHFRP00374 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DHFRP00374 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
DHFRP00374 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DHFRP00374 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DHFRP00374 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
DHFRP00374 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DHFRP00374 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.12■□□□□ 0.33
DHFRP00374 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DHFRP00374 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
DHFRP00374 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
DHFRP00374 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
DHFRP00374 AC018470.1-201ENST00000624790 3129 ntBASIC17.11■□□□□ 0.33
DHFRP00374 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DHFRP00374 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
DHFRP00374 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DHFRP00374 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DHFRP00374 SERBP1P1-201ENST00000396021 1160 ntBASIC17.11■□□□□ 0.33
DHFRP00374 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DHFRP00374 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DHFRP00374 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
DHFRP00374 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.11■□□□□ 0.33
DHFRP00374 PCDHB18P-201ENST00000524813 2368 ntBASIC17.11■□□□□ 0.33
DHFRP00374 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DHFRP00374 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DHFRP00374 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.11■□□□□ 0.33
DHFRP00374 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.11■□□□□ 0.33
DHFRP00374 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DHFRP00374 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DHFRP00374 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DHFRP00374 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
DHFRP00374 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DHFRP00374 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DHFRP00374 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.1■□□□□ 0.33
DHFRP00374 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DHFRP00374 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
DHFRP00374 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
DHFRP00374 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.1■□□□□ 0.33
DHFRP00374 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
DHFRP00374 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
DHFRP00374 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DHFRP00374 AC008406.3-201ENST00000620001 1374 ntBASIC17.1■□□□□ 0.33
DHFRP00374 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DHFRP00374 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DHFRP00374 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DHFRP00374 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.1■□□□□ 0.33
DHFRP00374 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DHFRP00374 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.09■□□□□ 0.33
DHFRP00374 AL691432.2-201ENST00000607222 2038 ntBASIC17.09■□□□□ 0.33
DHFRP00374 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DHFRP00374 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DHFRP00374 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DHFRP00374 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DHFRP00374 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
DHFRP00374 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DHFRP00374 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DHFRP00374 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DHFRP00374 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.09■□□□□ 0.33
DHFRP00374 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DHFRP00374 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
DHFRP00374 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DHFRP00374 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.09■□□□□ 0.33
DHFRP00374 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DHFRP00374 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DHFRP00374 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DHFRP00374 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DHFRP00374 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DHFRP00374 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.09■□□□□ 0.33
DHFRP00374 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DHFRP00374 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DHFRP00374 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
DHFRP00374 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.09■□□□□ 0.33
DHFRP00374 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.09■□□□□ 0.33
DHFRP00374 AL032819.2-201ENST00000624543 2162 ntBASIC17.09■□□□□ 0.33
DHFRP00374 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DHFRP00374 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
DHFRP00374 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DHFRP00374 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DHFRP00374 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DHFRP00374 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DHFRP00374 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DHFRP00374 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DHFRP00374 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.08■□□□□ 0.33
DHFRP00374 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.08■□□□□ 0.33
DHFRP00374 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DHFRP00374 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
DHFRP00374 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
DHFRP00374 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
DHFRP00374 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
DHFRP00374 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.08■□□□□ 0.33
DHFRP00374 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DHFRP00374 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
DHFRP00374 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.08■□□□□ 0.32
DHFRP00374 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms