Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM13O60858 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM13O60858 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM13O60858 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TRIM13O60858 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM13O60858 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM13O60858 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM13O60858 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM13O60858 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM13O60858 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM13O60858 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM13O60858 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM13O60858 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM13O60858 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM13O60858 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.47■□□□□ 0.71
TRIM13O60858 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM13O60858 MCRIP2P1-201ENST00000394346 511 ntBASIC19.47■□□□□ 0.71
TRIM13O60858 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM13O60858 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TRIM13O60858 AC100791.3-201ENST00000617619 330 ntBASIC19.47■□□□□ 0.71
TRIM13O60858 AC013268.1-206ENST00000638368 961 ntBASIC19.47■□□□□ 0.71
TRIM13O60858 AC112229.1-201ENST00000639295 961 ntBASIC19.47■□□□□ 0.71
TRIM13O60858 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM13O60858 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM13O60858 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM13O60858 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM13O60858 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM13O60858 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM13O60858 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM13O60858 AC120498.9-201ENST00000339021 3867 ntBASIC19.47■□□□□ 0.71
TRIM13O60858 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TRIM13O60858 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM13O60858 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TRIM13O60858 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM13O60858 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM13O60858 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM13O60858 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM13O60858 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM13O60858 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM13O60858 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM13O60858 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM13O60858 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM13O60858 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.46■□□□□ 0.71
TRIM13O60858 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.46■□□□□ 0.71
TRIM13O60858 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM13O60858 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM13O60858 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TRIM13O60858 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM13O60858 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM13O60858 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM13O60858 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM13O60858 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM13O60858 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM13O60858 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TRIM13O60858 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM13O60858 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.46■□□□□ 0.71
TRIM13O60858 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM13O60858 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM13O60858 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM13O60858 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM13O60858 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TRIM13O60858 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM13O60858 AC138932.1-201ENST00000534164 6830 ntBASIC19.45■□□□□ 0.7
TRIM13O60858 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM13O60858 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM13O60858 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.45■□□□□ 0.7
TRIM13O60858 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TRIM13O60858 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TRIM13O60858 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM13O60858 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM13O60858 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM13O60858 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM13O60858 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM13O60858 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM13O60858 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM13O60858 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM13O60858 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM13O60858 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM13O60858 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TRIM13O60858 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM13O60858 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM13O60858 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM13O60858 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM13O60858 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM13O60858 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM13O60858 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM13O60858 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM13O60858 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM13O60858 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.44■□□□□ 0.7
TRIM13O60858 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM13O60858 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TRIM13O60858 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM13O60858 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM13O60858 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.44■□□□□ 0.7
TRIM13O60858 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM13O60858 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM13O60858 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM13O60858 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM13O60858 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM13O60858 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms