Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
SSNA1O43805 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.88■□□□□ 0.29
SSNA1O43805 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SSNA1O43805 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC16.88■□□□□ 0.29
SSNA1O43805 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSNA1O43805 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SSNA1O43805 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SSNA1O43805 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SSNA1O43805 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.88■□□□□ 0.29
SSNA1O43805 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.88■□□□□ 0.29
SSNA1O43805 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSNA1O43805 AC055733.4-201ENST00000638462 1354 ntBASIC16.88■□□□□ 0.29
SSNA1O43805 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSNA1O43805 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSNA1O43805 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SSNA1O43805 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SSNA1O43805 AP000997.3-201ENST00000623333 2250 ntBASIC16.87■□□□□ 0.29
SSNA1O43805 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SSNA1O43805 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SSNA1O43805 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSNA1O43805 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSNA1O43805 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSNA1O43805 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.87■□□□□ 0.29
SSNA1O43805 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SSNA1O43805 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.87■□□□□ 0.29
SSNA1O43805 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSNA1O43805 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSNA1O43805 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SSNA1O43805 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SSNA1O43805 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
SSNA1O43805 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.87■□□□□ 0.29
SSNA1O43805 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SSNA1O43805 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSNA1O43805 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.87■□□□□ 0.29
SSNA1O43805 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSNA1O43805 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SSNA1O43805 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.87■□□□□ 0.29
SSNA1O43805 AC009113.1-201ENST00000570267 2443 ntBASIC16.87■□□□□ 0.29
SSNA1O43805 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSNA1O43805 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSNA1O43805 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSNA1O43805 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SSNA1O43805 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
SSNA1O43805 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSNA1O43805 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSNA1O43805 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.86■□□□□ 0.29
SSNA1O43805 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSNA1O43805 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.86■□□□□ 0.29
SSNA1O43805 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSNA1O43805 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.86■□□□□ 0.29
SSNA1O43805 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.86■□□□□ 0.29
SSNA1O43805 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.86■□□□□ 0.29
SSNA1O43805 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.86■□□□□ 0.29
SSNA1O43805 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSNA1O43805 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.86■□□□□ 0.29
SSNA1O43805 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SSNA1O43805 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSNA1O43805 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.86■□□□□ 0.29
SSNA1O43805 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSNA1O43805 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SSNA1O43805 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SSNA1O43805 AC135050.7-201ENST00000624508 2218 ntBASIC16.86■□□□□ 0.29
SSNA1O43805 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSNA1O43805 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSNA1O43805 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.86■□□□□ 0.29
SSNA1O43805 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SSNA1O43805 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SSNA1O43805 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.86■□□□□ 0.29
SSNA1O43805 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSNA1O43805 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSNA1O43805 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSNA1O43805 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SSNA1O43805 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSNA1O43805 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SSNA1O43805 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSNA1O43805 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.85■□□□□ 0.29
SSNA1O43805 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSNA1O43805 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SSNA1O43805 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSNA1O43805 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
SSNA1O43805 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SSNA1O43805 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
SSNA1O43805 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SSNA1O43805 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
SSNA1O43805 AC006455.2-201ENST00000429931 906 ntBASIC16.85■□□□□ 0.29
SSNA1O43805 ABHD17AP3-201ENST00000503096 1137 ntBASIC16.85■□□□□ 0.29
SSNA1O43805 MIR4449-201ENST00000578365 66 ntBASIC16.85■□□□□ 0.29
SSNA1O43805 MIR4508-201ENST00000584178 70 ntBASIC16.85■□□□□ 0.29
SSNA1O43805 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSNA1O43805 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSNA1O43805 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSNA1O43805 AC021242.3-201ENST00000607598 1377 ntBASIC16.85■□□□□ 0.29
SSNA1O43805 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSNA1O43805 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
SSNA1O43805 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSNA1O43805 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSNA1O43805 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.85■□□□□ 0.29
SSNA1O43805 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSNA1O43805 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSNA1O43805 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms