Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF3IP2O43734 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRAF3IP2O43734 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TRAF3IP2O43734 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF3IP2O43734 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TRAF3IP2O43734 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TRAF3IP2O43734 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAF3IP2O43734 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP2O43734 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP2O43734 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP2O43734 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.65■□□□□ 0.42
TRAF3IP2O43734 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP2O43734 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.65■□□□□ 0.42
TRAF3IP2O43734 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP2O43734 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TRAF3IP2O43734 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP2O43734 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRAF3IP2O43734 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.65■□□□□ 0.42
TRAF3IP2O43734 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.65■□□□□ 0.42
TRAF3IP2O43734 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TRAF3IP2O43734 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP2O43734 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP2O43734 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP2O43734 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAF3IP2O43734 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TRAF3IP2O43734 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP2O43734 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP2O43734 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.65■□□□□ 0.42
TRAF3IP2O43734 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP2O43734 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRAF3IP2O43734 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.64■□□□□ 0.42
TRAF3IP2O43734 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRAF3IP2O43734 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF3IP2O43734 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF3IP2O43734 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAF3IP2O43734 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF3IP2O43734 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAF3IP2O43734 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAF3IP2O43734 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAF3IP2O43734 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.64■□□□□ 0.41
TRAF3IP2O43734 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAF3IP2O43734 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF3IP2O43734 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAF3IP2O43734 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.64■□□□□ 0.41
TRAF3IP2O43734 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF3IP2O43734 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.64■□□□□ 0.41
TRAF3IP2O43734 SOX15-203ENST00000570788 1093 ntBASIC17.64■□□□□ 0.41
TRAF3IP2O43734 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
TRAF3IP2O43734 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TRAF3IP2O43734 AC116351.2-201ENST00000606540 1585 ntBASIC17.64■□□□□ 0.41
TRAF3IP2O43734 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF3IP2O43734 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF3IP2O43734 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF3IP2O43734 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 AC124283.5-201ENST00000624661 1809 ntBASIC17.63■□□□□ 0.41
TRAF3IP2O43734 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAF3IP2O43734 AC018553.1-201ENST00000616682 1458 ntBASIC17.63■□□□□ 0.41
TRAF3IP2O43734 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP2O43734 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAF3IP2O43734 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP2O43734 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP2O43734 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP2O43734 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRAF3IP2O43734 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAF3IP2O43734 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP2O43734 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAF3IP2O43734 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP2O43734 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP2O43734 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP2O43734 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP2O43734 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP2O43734 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.62■□□□□ 0.41
TRAF3IP2O43734 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms