Protein–RNA interactions for Protein: O15079

SNPH, Syntaphilin, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNPHO15079 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNPHO15079 SMG8-203ENST00000578922 2178 ntBASIC18.63■□□□□ 0.57
SNPHO15079 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNPHO15079 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNPHO15079 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNPHO15079 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.63■□□□□ 0.57
SNPHO15079 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNPHO15079 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNPHO15079 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SNPHO15079 GABARAPL3-202ENST00000624044 1851 ntBASIC18.63■□□□□ 0.57
SNPHO15079 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNPHO15079 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNPHO15079 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNPHO15079 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNPHO15079 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNPHO15079 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNPHO15079 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SNPHO15079 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.62■□□□□ 0.57
SNPHO15079 DUSP5P2-201ENST00000426873 1033 ntBASIC18.62■□□□□ 0.57
SNPHO15079 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SNPHO15079 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.62■□□□□ 0.57
SNPHO15079 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.62■□□□□ 0.57
SNPHO15079 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.62■□□□□ 0.57
SNPHO15079 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.62■□□□□ 0.57
SNPHO15079 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.62■□□□□ 0.57
SNPHO15079 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.62■□□□□ 0.57
SNPHO15079 AP000240.1-201ENST00000609910 452 ntBASIC18.62■□□□□ 0.57
SNPHO15079 MYC-209ENST00000641252 345 ntBASIC18.62■□□□□ 0.57
SNPHO15079 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNPHO15079 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.62■□□□□ 0.57
SNPHO15079 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNPHO15079 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNPHO15079 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
SNPHO15079 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNPHO15079 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNPHO15079 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.62■□□□□ 0.57
SNPHO15079 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.62■□□□□ 0.57
SNPHO15079 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNPHO15079 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNPHO15079 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNPHO15079 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.61■□□□□ 0.57
SNPHO15079 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNPHO15079 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNPHO15079 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNPHO15079 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNPHO15079 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.61■□□□□ 0.57
SNPHO15079 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SNPHO15079 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNPHO15079 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNPHO15079 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.61■□□□□ 0.57
SNPHO15079 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
SNPHO15079 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SNPHO15079 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNPHO15079 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.61■□□□□ 0.57
SNPHO15079 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNPHO15079 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNPHO15079 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.61■□□□□ 0.57
SNPHO15079 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SNPHO15079 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNPHO15079 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNPHO15079 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.61■□□□□ 0.57
SNPHO15079 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC18.61■□□□□ 0.57
SNPHO15079 AC009712.1-201ENST00000564938 316 ntBASIC18.61■□□□□ 0.57
SNPHO15079 AL356652.1-201ENST00000615962 565 ntBASIC18.61■□□□□ 0.57
SNPHO15079 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNPHO15079 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNPHO15079 AC098818.2-201ENST00000564925 2320 ntBASIC18.61■□□□□ 0.57
SNPHO15079 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNPHO15079 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNPHO15079 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNPHO15079 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNPHO15079 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.6■□□□□ 0.57
SNPHO15079 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
SNPHO15079 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.6■□□□□ 0.57
SNPHO15079 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.6■□□□□ 0.57
SNPHO15079 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.6■□□□□ 0.57
SNPHO15079 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNPHO15079 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNPHO15079 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNPHO15079 AL845331.1-201ENST00000424978 1190 ntBASIC18.6■□□□□ 0.57
SNPHO15079 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.6■□□□□ 0.57
SNPHO15079 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.6■□□□□ 0.57
SNPHO15079 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.6■□□□□ 0.57
SNPHO15079 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNPHO15079 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNPHO15079 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
SNPHO15079 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNPHO15079 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNPHO15079 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.6■□□□□ 0.57
SNPHO15079 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.6■□□□□ 0.57
SNPHO15079 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNPHO15079 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNPHO15079 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SNPHO15079 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SNPHO15079 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNPHO15079 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.59■□□□□ 0.57
SNPHO15079 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNPHO15079 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SNPHO15079 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNPHO15079 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms