Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 FZD10-202ENST00000539839 3282 ntBASIC12.57□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 AC018470.1-201ENST00000624790 3129 ntBASIC12.55□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC12.55□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC12.55□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 pRNA.6-201ENST00000610482 90 ntBASIC12.55□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 pRNA.5-201ENST00000612139 90 ntBASIC12.55□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 pRNA.11-201ENST00000618423 90 ntBASIC12.55□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 pRNA.13-201ENST00000619112 90 ntBASIC12.55□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC12.55□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC12.55□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC12.54□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC12.54□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC12.54□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC12.54□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC12.54□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC12.54□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC12.54□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC12.54□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms