Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.65■□□□□ 0.1
LINC01548A6NM66 AL359736.2-201ENST00000621992 437 ntBASIC15.65■□□□□ 0.1
LINC01548A6NM66 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01548A6NM66 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01548A6NM66 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01548A6NM66 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01548A6NM66 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01548A6NM66 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01548A6NM66 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01548A6NM66 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01548A6NM66 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
LINC01548A6NM66 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01548A6NM66 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01548A6NM66 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01548A6NM66 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
LINC01548A6NM66 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01548A6NM66 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.1
LINC01548A6NM66 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
LINC01548A6NM66 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01548A6NM66 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC01548A6NM66 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC01548A6NM66 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01548A6NM66 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC01548A6NM66 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.64■□□□□ 0.09
LINC01548A6NM66 AC073130.3-201ENST00000624389 2278 ntBASIC15.64■□□□□ 0.09
LINC01548A6NM66 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC01548A6NM66 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01548A6NM66 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01548A6NM66 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.64■□□□□ 0.09
LINC01548A6NM66 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC01548A6NM66 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01548A6NM66 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
LINC01548A6NM66 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.64■□□□□ 0.09
LINC01548A6NM66 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
LINC01548A6NM66 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LINC01548A6NM66 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01548A6NM66 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01548A6NM66 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.64■□□□□ 0.09
LINC01548A6NM66 AL121829.2-201ENST00000620908 328 ntBASIC15.64■□□□□ 0.09
LINC01548A6NM66 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01548A6NM66 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01548A6NM66 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC01548A6NM66 AC018553.1-201ENST00000616682 1458 ntBASIC15.64■□□□□ 0.09
LINC01548A6NM66 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC15.64■□□□□ 0.09
LINC01548A6NM66 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LINC01548A6NM66 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01548A6NM66 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01548A6NM66 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01548A6NM66 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.64■□□□□ 0.09
LINC01548A6NM66 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC15.63■□□□□ 0.09
LINC01548A6NM66 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.63■□□□□ 0.09
LINC01548A6NM66 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
LINC01548A6NM66 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
LINC01548A6NM66 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01548A6NM66 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01548A6NM66 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01548A6NM66 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01548A6NM66 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01548A6NM66 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01548A6NM66 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
LINC01548A6NM66 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01548A6NM66 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
LINC01548A6NM66 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.63■□□□□ 0.09
LINC01548A6NM66 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01548A6NM66 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
LINC01548A6NM66 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01548A6NM66 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.63■□□□□ 0.09
LINC01548A6NM66 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.63■□□□□ 0.09
LINC01548A6NM66 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.63■□□□□ 0.09
LINC01548A6NM66 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
LINC01548A6NM66 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.63■□□□□ 0.09
LINC01548A6NM66 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01548A6NM66 PHGDH-210ENST00000641115 1638 ntBASIC15.63■□□□□ 0.09
LINC01548A6NM66 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01548A6NM66 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
LINC01548A6NM66 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01548A6NM66 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
LINC01548A6NM66 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01548A6NM66 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
LINC01548A6NM66 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01548A6NM66 TCF3P1-201ENST00000423021 1937 ntBASIC15.62■□□□□ 0.09
LINC01548A6NM66 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01548A6NM66 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01548A6NM66 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01548A6NM66 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LINC01548A6NM66 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01548A6NM66 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01548A6NM66 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
LINC01548A6NM66 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01548A6NM66 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01548A6NM66 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.62■□□□□ 0.09
LINC01548A6NM66 KRASP1-201ENST00000407852 552 ntBASIC15.62■□□□□ 0.09
LINC01548A6NM66 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC01548A6NM66 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01548A6NM66 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC01548A6NM66 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.62■□□□□ 0.09
LINC01548A6NM66 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.62■□□□□ 0.09
LINC01548A6NM66 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01548A6NM66 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.62■□□□□ 0.09
LINC01548A6NM66 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms