Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 AC061975.6-201ENST00000579045 1553 ntBASIC14.07□□□□□ -0.16
LINC01549A6NIU2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 FAM21FP-204ENST00000608637 956 ntBASIC14.06□□□□□ -0.16
LINC01549A6NIU2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC01549A6NIU2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 SERBP1P1-201ENST00000396021 1160 ntBASIC14.05□□□□□ -0.16
LINC01549A6NIU2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 RARRES2P11-201ENST00000635158 484 ntBASIC14.05□□□□□ -0.16
LINC01549A6NIU2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 AL032819.2-201ENST00000624543 2162 ntBASIC14.05□□□□□ -0.16
LINC01549A6NIU2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LINC01549A6NIU2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 PWWP2AP1-201ENST00000429776 2273 ntBASIC14.04□□□□□ -0.16
LINC01549A6NIU2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 AC020916.1-201ENST00000587762 1774 ntBASIC14.04□□□□□ -0.16
LINC01549A6NIU2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01549A6NIU2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms