Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TRBV5-4A0A0C4DH59 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV5-4A0A0C4DH59 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
TRBV5-4A0A0C4DH59 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV5-4A0A0C4DH59 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV5-4A0A0C4DH59 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV5-4A0A0C4DH59 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.54■□□□□ 0.72
TRBV5-4A0A0C4DH59 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.54■□□□□ 0.72
TRBV5-4A0A0C4DH59 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV5-4A0A0C4DH59 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV5-4A0A0C4DH59 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV5-4A0A0C4DH59 SLC25A24-204ENST00000569674 2357 ntBASIC19.54■□□□□ 0.72
TRBV5-4A0A0C4DH59 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TRBV5-4A0A0C4DH59 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV5-4A0A0C4DH59 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV5-4A0A0C4DH59 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.54■□□□□ 0.72
TRBV5-4A0A0C4DH59 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.54■□□□□ 0.72
TRBV5-4A0A0C4DH59 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
TRBV5-4A0A0C4DH59 AC069544.1-201ENST00000609399 999 ntBASIC19.54■□□□□ 0.72
TRBV5-4A0A0C4DH59 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV5-4A0A0C4DH59 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV5-4A0A0C4DH59 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.54■□□□□ 0.72
TRBV5-4A0A0C4DH59 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.54■□□□□ 0.72
TRBV5-4A0A0C4DH59 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV5-4A0A0C4DH59 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TRBV5-4A0A0C4DH59 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV5-4A0A0C4DH59 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.54■□□□□ 0.72
TRBV5-4A0A0C4DH59 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.54■□□□□ 0.72
TRBV5-4A0A0C4DH59 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.53■□□□□ 0.72
TRBV5-4A0A0C4DH59 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV5-4A0A0C4DH59 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV5-4A0A0C4DH59 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TRBV5-4A0A0C4DH59 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV5-4A0A0C4DH59 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV5-4A0A0C4DH59 KRT17P3-201ENST00000420566 1262 ntBASIC19.53■□□□□ 0.72
TRBV5-4A0A0C4DH59 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV5-4A0A0C4DH59 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.53■□□□□ 0.72
TRBV5-4A0A0C4DH59 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.53■□□□□ 0.72
TRBV5-4A0A0C4DH59 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.53■□□□□ 0.72
TRBV5-4A0A0C4DH59 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.53■□□□□ 0.72
TRBV5-4A0A0C4DH59 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.53■□□□□ 0.72
TRBV5-4A0A0C4DH59 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TRBV5-4A0A0C4DH59 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.53■□□□□ 0.72
TRBV5-4A0A0C4DH59 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV5-4A0A0C4DH59 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.53■□□□□ 0.72
TRBV5-4A0A0C4DH59 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.53■□□□□ 0.72
TRBV5-4A0A0C4DH59 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV5-4A0A0C4DH59 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV5-4A0A0C4DH59 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.52■□□□□ 0.72
TRBV5-4A0A0C4DH59 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV5-4A0A0C4DH59 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV5-4A0A0C4DH59 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV5-4A0A0C4DH59 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.52■□□□□ 0.72
TRBV5-4A0A0C4DH59 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV5-4A0A0C4DH59 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV5-4A0A0C4DH59 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TRBV5-4A0A0C4DH59 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV5-4A0A0C4DH59 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV5-4A0A0C4DH59 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV5-4A0A0C4DH59 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.52■□□□□ 0.72
TRBV5-4A0A0C4DH59 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.52■□□□□ 0.72
TRBV5-4A0A0C4DH59 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.52■□□□□ 0.72
TRBV5-4A0A0C4DH59 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV5-4A0A0C4DH59 AC233263.1-201ENST00000578059 224 ntBASIC19.52■□□□□ 0.72
TRBV5-4A0A0C4DH59 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.52■□□□□ 0.72
TRBV5-4A0A0C4DH59 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.52■□□□□ 0.72
TRBV5-4A0A0C4DH59 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV5-4A0A0C4DH59 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV5-4A0A0C4DH59 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV5-4A0A0C4DH59 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TRBV5-4A0A0C4DH59 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV5-4A0A0C4DH59 TREX1-205ENST00000625293 1783 ntBASIC19.52■□□□□ 0.71
TRBV5-4A0A0C4DH59 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.52■□□□□ 0.71
TRBV5-4A0A0C4DH59 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRBV5-4A0A0C4DH59 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.52■□□□□ 0.71
TRBV5-4A0A0C4DH59 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TRBV5-4A0A0C4DH59 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
TRBV5-4A0A0C4DH59 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-4A0A0C4DH59 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-4A0A0C4DH59 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-4A0A0C4DH59 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-4A0A0C4DH59 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-4A0A0C4DH59 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.51■□□□□ 0.71
TRBV5-4A0A0C4DH59 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-4A0A0C4DH59 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.51■□□□□ 0.71
TRBV5-4A0A0C4DH59 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-4A0A0C4DH59 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-4A0A0C4DH59 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-4A0A0C4DH59 POU5F1P3-201ENST00000428824 1078 ntBASIC19.51■□□□□ 0.71
TRBV5-4A0A0C4DH59 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.51■□□□□ 0.71
TRBV5-4A0A0C4DH59 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.51■□□□□ 0.71
TRBV5-4A0A0C4DH59 MTDHP1-201ENST00000605323 784 ntBASIC19.51■□□□□ 0.71
TRBV5-4A0A0C4DH59 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
TRBV5-4A0A0C4DH59 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TRBV5-4A0A0C4DH59 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TRBV5-4A0A0C4DH59 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.51■□□□□ 0.71
TRBV5-4A0A0C4DH59 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-4A0A0C4DH59 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.51■□□□□ 0.71
TRBV5-4A0A0C4DH59 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-4A0A0C4DH59 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms