Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.97■□□□□ 0.47
TRAV17A0A0B4J275 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV17A0A0B4J275 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.97■□□□□ 0.47
TRAV17A0A0B4J275 KRT18P16-201ENST00000510337 1294 ntBASIC17.97■□□□□ 0.47
TRAV17A0A0B4J275 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRAV17A0A0B4J275 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAV17A0A0B4J275 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV17A0A0B4J275 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV17A0A0B4J275 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV17A0A0B4J275 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV17A0A0B4J275 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV17A0A0B4J275 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV17A0A0B4J275 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV17A0A0B4J275 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV17A0A0B4J275 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV17A0A0B4J275 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV17A0A0B4J275 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV17A0A0B4J275 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV17A0A0B4J275 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV17A0A0B4J275 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV17A0A0B4J275 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV17A0A0B4J275 AL390955.1-201ENST00000428694 934 ntBASIC17.96■□□□□ 0.47
TRAV17A0A0B4J275 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV17A0A0B4J275 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV17A0A0B4J275 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV17A0A0B4J275 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV17A0A0B4J275 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV17A0A0B4J275 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV17A0A0B4J275 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV17A0A0B4J275 PHGDH-210ENST00000641115 1638 ntBASIC17.96■□□□□ 0.47
TRAV17A0A0B4J275 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV17A0A0B4J275 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TRAV17A0A0B4J275 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRAV17A0A0B4J275 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 DGCR10-201ENST00000609839 495 ntBASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 AC131212.4-201ENST00000623606 975 ntBASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV17A0A0B4J275 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV17A0A0B4J275 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TRAV17A0A0B4J275 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV17A0A0B4J275 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV17A0A0B4J275 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAV17A0A0B4J275 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TRAV17A0A0B4J275 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.94■□□□□ 0.46
TRAV17A0A0B4J275 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV17A0A0B4J275 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TRAV17A0A0B4J275 AC113347.1-201ENST00000413321 391 ntBASIC17.94■□□□□ 0.46
TRAV17A0A0B4J275 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.94■□□□□ 0.46
TRAV17A0A0B4J275 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
TRAV17A0A0B4J275 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.94■□□□□ 0.46
TRAV17A0A0B4J275 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.94■□□□□ 0.46
TRAV17A0A0B4J275 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.94■□□□□ 0.46
TRAV17A0A0B4J275 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV17A0A0B4J275 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TRAV17A0A0B4J275 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV17A0A0B4J275 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV17A0A0B4J275 AIRN-201ENST00000601203 4374 ntBASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 C2orf69P3-201ENST00000565542 1120 ntBASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms