Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC14.02□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC14.02□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.02□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.02□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 AC004408.2-201ENST00000623613 2777 ntBASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 AC243732.1-201ENST00000612648 864 ntBASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 AC092666.2-201ENST00000613287 246 ntBASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 AC011767.1-201ENST00000617410 1153 ntBASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 AC010536.3-201ENST00000620306 533 ntBASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 AC013268.1-206ENST00000638368 961 ntBASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 AC112229.1-201ENST00000639295 961 ntBASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 AC125437.2-201ENST00000625180 2167 ntBASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms