Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.04■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.04■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.04■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.04■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 GCSHP5-201ENST00000443090 522 ntBASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 RPS2P52-201ENST00000469610 820 ntBASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 SOX15-203ENST00000570788 1093 ntBASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.02■□□□□ 0.48
TNFSF12-TNFSF13A0A0A6YY99 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.02■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.02■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.01■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.01■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.01■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.01■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.01■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 PHGDH-210ENST00000641115 1638 ntBASIC18.01■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.01■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18■□□□□ 0.47
TNFSF12-TNFSF13A0A0A6YY99 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms