Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RHBDL3P58872 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
RHBDL3P58872 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.73□□□□□ -1.17
RHBDL3P58872 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
RHBDL3P58872 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
RHBDL3P58872 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
RHBDL3P58872 RNU6-1331P-201ENST00000363658 106 ntBASIC7.73□□□□□ -1.17
RHBDL3P58872 RN7SKP15-201ENST00000364742 309 ntBASIC7.73□□□□□ -1.17
RHBDL3P58872 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
RHBDL3P58872 GCNT1P4-201ENST00000404096 329 ntBASIC7.73□□□□□ -1.17
RHBDL3P58872 AC092865.3-201ENST00000425390 1026 ntBASIC7.73□□□□□ -1.17
RHBDL3P58872 FTH1P10-202ENST00000430907 550 ntBASIC7.73□□□□□ -1.17
RHBDL3P58872 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.73□□□□□ -1.17
RHBDL3P58872 AL392003.1-201ENST00000434394 243 ntBASIC7.73□□□□□ -1.17
RHBDL3P58872 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.73□□□□□ -1.17
RHBDL3P58872 RPL12P24-201ENST00000474907 486 ntBASIC7.73□□□□□ -1.17
RHBDL3P58872 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
RHBDL3P58872 TPRX1P1-201ENST00000557620 319 ntBASIC7.73□□□□□ -1.17
RHBDL3P58872 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC7.73□□□□□ -1.17
RHBDL3P58872 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RHBDL3P58872 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.73□□□□□ -1.17
RHBDL3P58872 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC7.73□□□□□ -1.17
RHBDL3P58872 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.73□□□□□ -1.17
RHBDL3P58872 RN7SL261P-201ENST00000613441 282 ntBASIC7.73□□□□□ -1.17
RHBDL3P58872 AL359742.1-201ENST00000622497 540 ntBASIC7.73□□□□□ -1.17
RHBDL3P58872 AL357140.4-201ENST00000636827 412 ntBASIC7.73□□□□□ -1.17
RHBDL3P58872 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RHBDL3P58872 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
RHBDL3P58872 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RHBDL3P58872 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
RHBDL3P58872 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RHBDL3P58872 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC7.73□□□□□ -1.17
RHBDL3P58872 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RHBDL3P58872 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
RHBDL3P58872 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RHBDL3P58872 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.73□□□□□ -1.17
RHBDL3P58872 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
RHBDL3P58872 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RHBDL3P58872 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.73□□□□□ -1.17
RHBDL3P58872 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.73□□□□□ -1.17
RHBDL3P58872 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.72□□□□□ -1.17
RHBDL3P58872 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.72□□□□□ -1.17
RHBDL3P58872 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RHBDL3P58872 DPY19L1P1-201ENST00000417811 2594 ntBASIC7.72□□□□□ -1.17
RHBDL3P58872 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RHBDL3P58872 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.72□□□□□ -1.17
RHBDL3P58872 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.72□□□□□ -1.17
RHBDL3P58872 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RHBDL3P58872 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RHBDL3P58872 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.72□□□□□ -1.17
RHBDL3P58872 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
RHBDL3P58872 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RHBDL3P58872 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RHBDL3P58872 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RHBDL3P58872 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC7.72□□□□□ -1.17
RHBDL3P58872 AL139805.1-201ENST00000407837 289 ntBASIC7.72□□□□□ -1.17
RHBDL3P58872 RN7SKP240-201ENST00000410583 375 ntBASIC7.72□□□□□ -1.17
RHBDL3P58872 VN1R31P-201ENST00000417498 730 ntBASIC7.72□□□□□ -1.17
RHBDL3P58872 CYCSP52-201ENST00000422857 310 ntBASIC7.72□□□□□ -1.17
RHBDL3P58872 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
RHBDL3P58872 AC094019.1-201ENST00000434678 472 ntBASIC7.72□□□□□ -1.17
RHBDL3P58872 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC7.72□□□□□ -1.17
RHBDL3P58872 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC7.72□□□□□ -1.17
RHBDL3P58872 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC7.72□□□□□ -1.17
RHBDL3P58872 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
RHBDL3P58872 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.72□□□□□ -1.17
RHBDL3P58872 AC002519.2-203ENST00000567043 837 ntBASIC7.72□□□□□ -1.17
RHBDL3P58872 MIR4701-201ENST00000583094 63 ntBASIC7.72□□□□□ -1.17
RHBDL3P58872 RPSAP75-201ENST00000605848 301 ntBASIC7.72□□□□□ -1.17
RHBDL3P58872 AC016911.1-201ENST00000613297 452 ntBASIC7.72□□□□□ -1.17
RHBDL3P58872 MIR6811-201ENST00000620409 58 ntBASIC7.72□□□□□ -1.17
RHBDL3P58872 AC012653.2-201ENST00000621880 420 ntBASIC7.72□□□□□ -1.17
RHBDL3P58872 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.72□□□□□ -1.17
RHBDL3P58872 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RHBDL3P58872 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
RHBDL3P58872 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.72□□□□□ -1.17
RHBDL3P58872 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.72□□□□□ -1.17
RHBDL3P58872 AC112255.1-201ENST00000624070 2493 ntBASIC7.72□□□□□ -1.17
RHBDL3P58872 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RHBDL3P58872 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RHBDL3P58872 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RHBDL3P58872 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RHBDL3P58872 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
RHBDL3P58872 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
RHBDL3P58872 AC005261.6-201ENST00000623072 1387 ntBASIC7.71□□□□□ -1.17
RHBDL3P58872 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.71□□□□□ -1.17
RHBDL3P58872 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
RHBDL3P58872 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
RHBDL3P58872 MAPK10-383ENST00000642032 3390 ntBASIC7.71□□□□□ -1.17
RHBDL3P58872 AL596244.1-201ENST00000567068 3779 ntBASIC7.71□□□□□ -1.17
RHBDL3P58872 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
RHBDL3P58872 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
RHBDL3P58872 SAGE3P-201ENST00000619800 1635 ntBASIC7.71□□□□□ -1.17
RHBDL3P58872 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
RHBDL3P58872 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
RHBDL3P58872 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
RHBDL3P58872 CASC19-228ENST00000641414 1684 ntBASIC7.71□□□□□ -1.18
RHBDL3P58872 Z83820.1-201ENST00000456978 1499 ntBASIC7.71□□□□□ -1.18
RHBDL3P58872 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
RHBDL3P58872 RNU6-819P-201ENST00000364116 107 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms