RNA–Protein interactions for RNA: ENST00000410583.1

RN7SKP240-201, Transcript of RNA, 7SK small nuclear pseudogene 240, humanhuman

BASIC

Gene RN7SKP240, Length 375 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP240-201ENST00000410583 AEBP2Q6ZN18 517 aaPredicted RBP22.42■■□□□ 1.18
RN7SKP240-201ENST00000410583 CHIC1Q5VXU3 224 aa20.88■□□□□ 0.93
RN7SKP240-201ENST00000410583 SENP3Q9H4L4 574 aaPredicted RBP19.12■□□□□ 0.65
RN7SKP240-201ENST00000410583 PHF23Q9BUL5 403 aaPredicted RBP18.84■□□□□ 0.61
RN7SKP240-201ENST00000410583 FOXD1Q16676 465 aa17.9■□□□□ 0.46
RN7SKP240-201ENST00000410583 POTEDQ86YR6 584 aa17.65■□□□□ 0.42
RN7SKP240-201ENST00000410583 MSH5O43196 834 aa16.85■□□□□ 0.29
RN7SKP240-201ENST00000410583 PIAS4Q8N2W9 510 aaPredicted RBP16.65■□□□□ 0.26
RN7SKP240-201ENST00000410583 PLPPR3Q6T4P5 718 aa16.49■□□□□ 0.23
RN7SKP240-201ENST00000410583 PPP6R1Q9UPN7 881 aa16.47■□□□□ 0.23
RN7SKP240-201ENST00000410583 ADRA2BP18089 450 aa16.4■□□□□ 0.22
RN7SKP240-201ENST00000410583 NISCHQ9Y2I1 1504 aa16.32■□□□□ 0.2
RN7SKP240-201ENST00000410583 ABCC9O60706 1549 aa15.21■□□□□ 0.03
RN7SKP240-201ENST00000410583 MAPK8IP2Q13387 824 aaPredicted RBP15.18■□□□□ 0.02
RN7SKP240-201ENST00000410583 DMRT2Q9Y5R5 561 aa15.11■□□□□ 0.01
RN7SKP240-201ENST00000410583 CCDC180Q9P1Z9 1646 aa14.97□□□□□ -0.01
RN7SKP240-201ENST00000410583 SCAF1Q9H7N4 1312 aaKnown RBP14.91□□□□□ -0.02
RN7SKP240-201ENST00000410583 CACNB1Q02641 598 aaPredicted RBP14.88□□□□□ -0.03
RN7SKP240-201ENST00000410583 DCAF8L1A6NGE4 600 aa14.57□□□□□ -0.08
RN7SKP240-201ENST00000410583 DNAJC5BQ9UF47 199 aa14.46□□□□□ -0.09
RN7SKP240-201ENST00000410583 PPP4R3CPQ6ZMV5 832 aa14.43□□□□□ -0.1
RN7SKP240-201ENST00000410583 HOXD11P31277 338 aaPredicted RBP14.4□□□□□ -0.1
RN7SKP240-201ENST00000410583 RNF39Q9H2S5 420 aa14.36□□□□□ -0.11
RN7SKP240-201ENST00000410583 RB1CC1Q8TDY2 1594 aa14.34□□□□□ -0.11
RN7SKP240-201ENST00000410583 CNKSR2Q8WXI2 1034 aa14.22□□□□□ -0.13
RN7SKP240-201ENST00000410583 UNC13AQ9UPW8 1703 aa14.2□□□□□ -0.14
RN7SKP240-201ENST00000410583 RNF216Q9NWF9 866 aaPredicted RBP14.19□□□□□ -0.14
RN7SKP240-201ENST00000410583 NACADO15069 1562 aa14.11□□□□□ -0.15
RN7SKP240-201ENST00000410583 C1QBPQ07021 282 aaKnown RBP14.1□□□□□ -0.15
RN7SKP240-201ENST00000410583 BICRAQ9NZM4 1560 aa13.98□□□□□ -0.17
RN7SKP240-201ENST00000410583 PABPN1Q86U42 306 aaKnown RBP eCLIP13.96□□□□□ -0.17
RN7SKP240-201ENST00000410583 CC2D2AQ9P2K1 1620 aa13.78□□□□□ -0.2
RN7SKP240-201ENST00000410583 MYO15BQ96JP2 1530 aa13.75□□□□□ -0.21
RN7SKP240-201ENST00000410583 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.74□□□□□ -0.21
RN7SKP240-201ENST00000410583 NCBP3Q53F19 620 aaKnown RBP13.72□□□□□ -0.21
RN7SKP240-201ENST00000410583 CECR2Q9BXF3 1484 aa13.72□□□□□ -0.21
RN7SKP240-201ENST00000410583 DCAF8L2P0C7V8 631 aa13.71□□□□□ -0.21
RN7SKP240-201ENST00000410583 SHROOM4Q9ULL8 1493 aa13.69□□□□□ -0.22
RN7SKP240-201ENST00000410583 POTEHQ6S545 545 aa13.68□□□□□ -0.22
RN7SKP240-201ENST00000410583 EIF4G1Q04637 1599 aaKnown RBP13.64□□□□□ -0.23
RN7SKP240-201ENST00000410583 SCRIBQ14160 1630 aa13.6□□□□□ -0.23
RN7SKP240-201ENST00000410583 NPM3O75607 178 aaKnown RBP13.58□□□□□ -0.24
RN7SKP240-201ENST00000410583 ZCCHC6Q5VYS8 1495 aaKnown RBP13.51□□□□□ -0.25
RN7SKP240-201ENST00000410583 DNAJC5Q9H3Z4 198 aa13.51□□□□□ -0.25
RN7SKP240-201ENST00000410583 DCAF1Q9Y4B6 1507 aa13.45□□□□□ -0.26
RN7SKP240-201ENST00000410583 U3KPZ7 1027 aaPredicted RBP13.44□□□□□ -0.26
RN7SKP240-201ENST00000410583 SPINK5Q9NQ38 1064 aaPredicted RBP13.37□□□□□ -0.27
RN7SKP240-201ENST00000410583 CAPN15O75808 1086 aa13.35□□□□□ -0.27
RN7SKP240-201ENST00000410583 DSG3P32926 999 aa13.34□□□□□ -0.27
RN7SKP240-201ENST00000410583 CUX2O14529 1486 aa13.26□□□□□ -0.29
RN7SKP240-201ENST00000410583 ERCC6Q03468 1493 aa13.14□□□□□ -0.31
RN7SKP240-201ENST00000410583 SLC4A2P04920 1241 aa13.08□□□□□ -0.32
RN7SKP240-201ENST00000410583 TRHP20396 242 aaPredicted RBP13.06□□□□□ -0.32
RN7SKP240-201ENST00000410583 ABCB7O75027 752 aa13.05□□□□□ -0.32
RN7SKP240-201ENST00000410583 THOC2Q8NI27 1593 aaKnown RBP13.05□□□□□ -0.32
RN7SKP240-201ENST00000410583 KCNA4P22459 653 aa13.02□□□□□ -0.33
RN7SKP240-201ENST00000410583 NESP48681 1621 aa12.98□□□□□ -0.33
RN7SKP240-201ENST00000410583 ZNF219Q9P2Y4 722 aaPredicted RBP12.96□□□□□ -0.33
RN7SKP240-201ENST00000410583 HMGXB3Q12766 1538 aa12.96□□□□□ -0.33
RN7SKP240-201ENST00000410583 NCAPD3P42695 1498 aa12.95□□□□□ -0.34
RN7SKP240-201ENST00000410583 KIF21AQ7Z4S6 1674 aa12.94□□□□□ -0.34
RN7SKP240-201ENST00000410583 APLP2Q06481 763 aa12.93□□□□□ -0.34
RN7SKP240-201ENST00000410583 SMARCA2P51531 1590 aa12.93□□□□□ -0.34
RN7SKP240-201ENST00000410583 SMARCA4P51532 1647 aa12.91□□□□□ -0.34
RN7SKP240-201ENST00000410583 ATAD2BQ9ULI0 1458 aa12.9□□□□□ -0.34
RN7SKP240-201ENST00000410583 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.84□□□□□ -0.35
RN7SKP240-201ENST00000410583 HNRNPUL2Q1KMD3 747 aaKnown RBP12.84□□□□□ -0.35
RN7SKP240-201ENST00000410583 LAMC3Q9Y6N6 1575 aa12.83□□□□□ -0.36
RN7SKP240-201ENST00000410583 TRIM41Q8WV44 630 aa12.82□□□□□ -0.36
RN7SKP240-201ENST00000410583 BAZ1BQ9UIG0 1483 aaKnown RBP12.78□□□□□ -0.36
RN7SKP240-201ENST00000410583 SAMD1Q6SPF0 538 aaPredicted RBP12.77□□□□□ -0.37
RN7SKP240-201ENST00000410583 BAZ1AQ9NRL2 1556 aaPredicted RBP12.76□□□□□ -0.37
RN7SKP240-201ENST00000410583 PEG3Q9GZU2 1588 aa12.75□□□□□ -0.37
RN7SKP240-201ENST00000410583 RBM42Q9BTD8 480 aaKnown RBP12.7□□□□□ -0.38
RN7SKP240-201ENST00000410583 WDR62O43379 1518 aa12.7□□□□□ -0.38
RN7SKP240-201ENST00000410583 MRC2Q9UBG0 1479 aa12.66□□□□□ -0.38
RN7SKP240-201ENST00000410583 PDS5BQ9NTI5 1447 aa12.64□□□□□ -0.39
RN7SKP240-201ENST00000410583 CHRDL2Q6WN34 429 aa12.61□□□□□ -0.39
RN7SKP240-201ENST00000410583 MROH2BQ7Z745 1585 aa12.6□□□□□ -0.39
RN7SKP240-201ENST00000410583 POLA2Q14181 598 aa12.59□□□□□ -0.39
RN7SKP240-201ENST00000410583 RIMBP3CA6NJZ7 1639 aa12.57□□□□□ -0.4
RN7SKP240-201ENST00000410583 RIMBP3BA6NNM3 1639 aa12.57□□□□□ -0.4
RN7SKP240-201ENST00000410583 RIMBP3Q9UFD9 1639 aa12.57□□□□□ -0.4
RN7SKP240-201ENST00000410583 MYCNP04198 464 aaPredicted RBP12.55□□□□□ -0.4
RN7SKP240-201ENST00000410583 CEP164Q9UPV0 1460 aa12.53□□□□□ -0.4
RN7SKP240-201ENST00000410583 CADPSQ9ULU8 1353 aa12.51□□□□□ -0.41
RN7SKP240-201ENST00000410583 WIZO95785 1651 aa12.5□□□□□ -0.41
RN7SKP240-201ENST00000410583 SP7Q8TDD2 431 aaPredicted RBP12.49□□□□□ -0.41
RN7SKP240-201ENST00000410583 PRDM2Q13029 1718 aa12.46□□□□□ -0.41
RN7SKP240-201ENST00000410583 FANCD2Q9BXW9 1451 aa12.46□□□□□ -0.42
RN7SKP240-201ENST00000410583 ARHGEF11O15085 1522 aa12.43□□□□□ -0.42
RN7SKP240-201ENST00000410583 URB2Q14146 1524 aaKnown RBP12.42□□□□□ -0.42
RN7SKP240-201ENST00000410583 OSCARQ8IYS5 282 aa12.38□□□□□ -0.43
RN7SKP240-201ENST00000410583 CHD1O14646 1710 aa12.37□□□□□ -0.43
RN7SKP240-201ENST00000410583 EIF4G3O43432 1585 aaKnown RBP12.35□□□□□ -0.43
RN7SKP240-201ENST00000410583 SLC4A1APQ9BWU0 796 aaKnown RBP12.35□□□□□ -0.43
RN7SKP240-201ENST00000410583 CFTRP13569 1480 aa12.34□□□□□ -0.43
RN7SKP240-201ENST00000410583 ATF5Q9Y2D1 282 aaPredicted RBP12.34□□□□□ -0.43
RN7SKP240-201ENST00000410583 AKT1S1Q96B36 256 aa12.33□□□□□ -0.44
RN7SKP240-201ENST00000410583 ZNF608Q9ULD9 1512 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms