Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
CD40P25942 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CD40P25942 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.3□□□□□ -1.4
CD40P25942 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CD40P25942 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CD40P25942 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
CD40P25942 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CD40P25942 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CD40P25942 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC6.3□□□□□ -1.4
CD40P25942 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC6.3□□□□□ -1.4
CD40P25942 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CD40P25942 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC6.3□□□□□ -1.4
CD40P25942 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC6.3□□□□□ -1.4
CD40P25942 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CD40P25942 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CD40P25942 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CD40P25942 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.3□□□□□ -1.4
CD40P25942 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
CD40P25942 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC6.29□□□□□ -1.4
CD40P25942 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CD40P25942 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.29□□□□□ -1.4
CD40P25942 AC091544.5-201ENST00000620192 3815 ntBASIC6.29□□□□□ -1.4
CD40P25942 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
CD40P25942 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CD40P25942 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CD40P25942 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
CD40P25942 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CD40P25942 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CD40P25942 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
CD40P25942 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CD40P25942 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CD40P25942 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.29□□□□□ -1.4
CD40P25942 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CD40P25942 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CD40P25942 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
CD40P25942 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CD40P25942 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CD40P25942 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CD40P25942 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CD40P25942 Y_RNA.169-201ENST00000363745 96 ntBASIC6.29□□□□□ -1.4
CD40P25942 RN7SKP174-201ENST00000363803 330 ntBASIC6.29□□□□□ -1.4
CD40P25942 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC6.29□□□□□ -1.4
CD40P25942 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CD40P25942 AL139100.1-201ENST00000408001 498 ntBASIC6.29□□□□□ -1.4
CD40P25942 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC6.29□□□□□ -1.4
CD40P25942 LINC01347-201ENST00000417964 355 ntBASIC6.29□□□□□ -1.4
CD40P25942 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CD40P25942 OR6R1P-201ENST00000431838 940 ntBASIC6.29□□□□□ -1.4
CD40P25942 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.29□□□□□ -1.4
CD40P25942 AL592114.2-201ENST00000440142 532 ntBASIC6.29□□□□□ -1.4
CD40P25942 KATNBL1P3-201ENST00000443475 909 ntBASIC6.29□□□□□ -1.4
CD40P25942 AC097499.1-201ENST00000444277 208 ntBASIC6.29□□□□□ -1.4
CD40P25942 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC6.29□□□□□ -1.4
CD40P25942 AC068135.1-201ENST00000446164 246 ntBASIC6.29□□□□□ -1.4
CD40P25942 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.29□□□□□ -1.4
CD40P25942 AC004815.1-201ENST00000484185 331 ntBASIC6.29□□□□□ -1.4
CD40P25942 RPL21P42-201ENST00000488408 464 ntBASIC6.29□□□□□ -1.4
CD40P25942 TECRP2-201ENST00000503270 928 ntBASIC6.29□□□□□ -1.4
CD40P25942 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.29□□□□□ -1.4
CD40P25942 SNORA3.4-201ENST00000515969 96 ntBASIC6.29□□□□□ -1.4
CD40P25942 RN7SKP34-201ENST00000516142 244 ntBASIC6.29□□□□□ -1.4
CD40P25942 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC6.29□□□□□ -1.4
CD40P25942 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.29□□□□□ -1.4
CD40P25942 AC006518.2-201ENST00000542513 940 ntBASIC6.29□□□□□ -1.4
CD40P25942 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.29□□□□□ -1.4
CD40P25942 DUXAP6-201ENST00000553858 601 ntBASIC6.29□□□□□ -1.4
CD40P25942 NDUFA3P4-201ENST00000560814 250 ntBASIC6.29□□□□□ -1.4
CD40P25942 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.29□□□□□ -1.4
CD40P25942 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC6.29□□□□□ -1.4
CD40P25942 AC023813.2-201ENST00000564321 469 ntBASIC6.29□□□□□ -1.4
CD40P25942 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CD40P25942 AC069366.1-201ENST00000583159 838 ntBASIC6.29□□□□□ -1.4
CD40P25942 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC6.29□□□□□ -1.4
CD40P25942 AC091057.2-201ENST00000602594 792 ntBASIC6.29□□□□□ -1.4
CD40P25942 MTND3P19-201ENST00000603825 345 ntBASIC6.29□□□□□ -1.4
CD40P25942 AC139795.3-201ENST00000606358 541 ntBASIC6.29□□□□□ -1.4
CD40P25942 AC009283.1-201ENST00000615852 645 ntBASIC6.29□□□□□ -1.4
CD40P25942 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.29□□□□□ -1.4
CD40P25942 AP003108.4-201ENST00000623917 878 ntBASIC6.29□□□□□ -1.4
CD40P25942 AL512506.2-201ENST00000624472 458 ntBASIC6.29□□□□□ -1.4
CD40P25942 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC6.29□□□□□ -1.4
CD40P25942 AL596275.2-207ENST00000641188 675 ntBASIC6.29□□□□□ -1.4
CD40P25942 AP003175.1-201ENST00000641383 6658 ntBASIC6.29□□□□□ -1.4
CD40P25942 OR7E161P-202ENST00000641994 1033 ntBASIC6.29□□□□□ -1.4
CD40P25942 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
CD40P25942 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CD40P25942 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CD40P25942 AC026464.2-201ENST00000567834 2421 ntBASIC6.29□□□□□ -1.4
CD40P25942 MAPK10-279ENST00000641157 2449 ntBASIC6.29□□□□□ -1.4
CD40P25942 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CD40P25942 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CD40P25942 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
CD40P25942 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC6.29□□□□□ -1.4
CD40P25942 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CD40P25942 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CD40P25942 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.29□□□□□ -1.4
CD40P25942 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CD40P25942 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CD40P25942 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.28□□□□□ -1.4
CD40P25942 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms