RNA–Protein interactions for RNA: ENST00000413632.6

LMNTD1-202, Transcript of lamin tail domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LMNTD1, Length 1,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNTD1-202ENST00000413632 AEBP2Q6ZN18 517 aaPredicted RBP24.4■■□□□ 1.5
LMNTD1-202ENST00000413632 CHIC1Q5VXU3 224 aa23.56■■□□□ 1.36
LMNTD1-202ENST00000413632 SENP3Q9H4L4 574 aaPredicted RBP20.82■□□□□ 0.92
LMNTD1-202ENST00000413632 PHF23Q9BUL5 403 aaPredicted RBP20.66■□□□□ 0.9
LMNTD1-202ENST00000413632 FOXD1Q16676 465 aa19.31■□□□□ 0.68
LMNTD1-202ENST00000413632 PLPPR3Q6T4P5 718 aa19.02■□□□□ 0.64
LMNTD1-202ENST00000413632 POTEDQ86YR6 584 aa18.59■□□□□ 0.57
LMNTD1-202ENST00000413632 PPP6R1Q9UPN7 881 aa18.33■□□□□ 0.52
LMNTD1-202ENST00000413632 ADRA2BP18089 450 aa18.32■□□□□ 0.52
LMNTD1-202ENST00000413632 PIAS4Q8N2W9 510 aaPredicted RBP18.18■□□□□ 0.5
LMNTD1-202ENST00000413632 MSH5O43196 834 aa17.98■□□□□ 0.47
LMNTD1-202ENST00000413632 SCAF1Q9H7N4 1312 aaKnown RBP16.81■□□□□ 0.28
LMNTD1-202ENST00000413632 PPP4R3CPQ6ZMV5 832 aa16.71■□□□□ 0.27
LMNTD1-202ENST00000413632 MAPK8IP2Q13387 824 aaPredicted RBP16.7■□□□□ 0.26
LMNTD1-202ENST00000413632 DMRT2Q9Y5R5 561 aa16.55■□□□□ 0.24
LMNTD1-202ENST00000413632 CNKSR2Q8WXI2 1034 aa16.32■□□□□ 0.2
LMNTD1-202ENST00000413632 NCBP3Q53F19 620 aaKnown RBP16.22■□□□□ 0.19
LMNTD1-202ENST00000413632 HOXD11P31277 338 aaPredicted RBP16.07■□□□□ 0.16
LMNTD1-202ENST00000413632 RNF216Q9NWF9 866 aaPredicted RBP16.07■□□□□ 0.16
LMNTD1-202ENST00000413632 KCNA4P22459 653 aa15.97■□□□□ 0.15
LMNTD1-202ENST00000413632 NPM3O75607 178 aaKnown RBP15.94■□□□□ 0.14
LMNTD1-202ENST00000413632 DCAF8L1A6NGE4 600 aa15.89■□□□□ 0.13
LMNTD1-202ENST00000413632 DNAJC5BQ9UF47 199 aa15.5■□□□□ 0.07
LMNTD1-202ENST00000413632 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.37■□□□□ 0.05
LMNTD1-202ENST00000413632 RNF39Q9H2S5 420 aa15.34■□□□□ 0.05
LMNTD1-202ENST00000413632 CACNB1Q02641 598 aaPredicted RBP15.23■□□□□ 0.03
LMNTD1-202ENST00000413632 SLC4A1APQ9BWU0 796 aaKnown RBP15.17■□□□□ 0.02
LMNTD1-202ENST00000413632 C1QBPQ07021 282 aaKnown RBP15.17■□□□□ 0.02
LMNTD1-202ENST00000413632 SLC4A2P04920 1241 aa15.11■□□□□ 0.01
LMNTD1-202ENST00000413632 U3KPZ7 1027 aaPredicted RBP15.04■□□□□ -0
LMNTD1-202ENST00000413632 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.8□□□□□ -0.04
LMNTD1-202ENST00000413632 HNRNPUL2Q1KMD3 747 aaKnown RBP14.8□□□□□ -0.04
LMNTD1-202ENST00000413632 FOXD4L1Q9NU39 408 aa14.8□□□□□ -0.04
LMNTD1-202ENST00000413632 MYCNP04198 464 aaPredicted RBP14.76□□□□□ -0.05
LMNTD1-202ENST00000413632 APLP2Q06481 763 aa14.73□□□□□ -0.05
LMNTD1-202ENST00000413632 SAMD1Q6SPF0 538 aaPredicted RBP14.72□□□□□ -0.05
LMNTD1-202ENST00000413632 SPINK5Q9NQ38 1064 aaPredicted RBP14.71□□□□□ -0.05
LMNTD1-202ENST00000413632 CAPN15O75808 1086 aa14.71□□□□□ -0.06
LMNTD1-202ENST00000413632 ZBTB22O15209 634 aa14.66□□□□□ -0.06
LMNTD1-202ENST00000413632 TRHP20396 242 aaPredicted RBP14.56□□□□□ -0.08
LMNTD1-202ENST00000413632 ZNF219Q9P2Y4 722 aaPredicted RBP14.55□□□□□ -0.08
LMNTD1-202ENST00000413632 DSG3P32926 999 aa14.49□□□□□ -0.09
LMNTD1-202ENST00000413632 EHMT2Q96KQ7 1210 aa14.4□□□□□ -0.1
LMNTD1-202ENST00000413632 ABCB7O75027 752 aa14.39□□□□□ -0.11
LMNTD1-202ENST00000413632 ATF5Q9Y2D1 282 aaPredicted RBP14.34□□□□□ -0.11
LMNTD1-202ENST00000413632 CSRNP3Q8WYN3 585 aa14.33□□□□□ -0.12
LMNTD1-202ENST00000413632 POTEHQ6S545 545 aa14.32□□□□□ -0.12
LMNTD1-202ENST00000413632 ATXN8OSP0DMR3 200 aa14.31□□□□□ -0.12
LMNTD1-202ENST00000413632 POLA2Q14181 598 aa14.24□□□□□ -0.13
LMNTD1-202ENST00000413632 ZBTB12Q9Y330 459 aaPredicted RBP14.02□□□□□ -0.16
LMNTD1-202ENST00000413632 RBM42Q9BTD8 480 aaKnown RBP13.88□□□□□ -0.19
LMNTD1-202ENST00000413632 FBLN2P98095 1184 aa13.84□□□□□ -0.19
LMNTD1-202ENST00000413632 OSCARQ8IYS5 282 aa13.77□□□□□ -0.21
LMNTD1-202ENST00000413632 MKRN4PQ13434 485 aaPredicted RBP13.71□□□□□ -0.21
LMNTD1-202ENST00000413632 AKT1S1Q96B36 256 aa13.61□□□□□ -0.23
LMNTD1-202ENST00000413632 SPDYE2BA6NHP3 402 aa13.59□□□□□ -0.23
LMNTD1-202ENST00000413632 SPDYE6P0CI01 402 aa13.59□□□□□ -0.23
LMNTD1-202ENST00000413632 SPDYE2Q495Y8 402 aa13.59□□□□□ -0.23
LMNTD1-202ENST00000413632 ZNF692Q9BU19 519 aaPredicted RBP13.49□□□□□ -0.25
LMNTD1-202ENST00000413632 REM2Q8IYK8 340 aaPredicted RBP13.47□□□□□ -0.25
LMNTD1-202ENST00000413632 SSUH2Q9Y2M2 353 aa13.43□□□□□ -0.26
LMNTD1-202ENST00000413632 CHRDL2Q6WN34 429 aa13.39□□□□□ -0.27
LMNTD1-202ENST00000413632 PITPNM1O00562 1244 aa13.33□□□□□ -0.28
LMNTD1-202ENST00000413632 PABPN1Q86U42 306 aaKnown RBP eCLIP13.3□□□□□ -0.28
LMNTD1-202ENST00000413632 SPDYE4A6NLX3 237 aa13.29□□□□□ -0.28
LMNTD1-202ENST00000413632 SPDYE1Q8NFV5 336 aaPredicted RBP13.28□□□□□ -0.28
LMNTD1-202ENST00000413632 CLEC11AQ9Y240 323 aa13.23□□□□□ -0.29
LMNTD1-202ENST00000413632 PIP4P2Q8N4L2 257 aa13.14□□□□□ -0.31
LMNTD1-202ENST00000413632 FXR2P51116 673 aaKnown RBP eCLIP13.12□□□□□ -0.31
LMNTD1-202ENST00000413632 PRR29P0C7W0 189 aa13.07□□□□□ -0.32
LMNTD1-202ENST00000413632 STAG3Q9UJ98 1225 aa13.03□□□□□ -0.32
LMNTD1-202ENST00000413632 FKBP8Q14318 412 aa13.01□□□□□ -0.33
LMNTD1-202ENST00000413632 PRKAR2AP13861 404 aaKnown RBP12.99□□□□□ -0.33
LMNTD1-202ENST00000413632 PROM2Q8N271 834 aa12.98□□□□□ -0.33
LMNTD1-202ENST00000413632 CHADLQ6NUI6 762 aa12.91□□□□□ -0.34
LMNTD1-202ENST00000413632 SP7Q8TDD2 431 aaPredicted RBP12.84□□□□□ -0.35
LMNTD1-202ENST00000413632 HAX1O00165 279 aa12.83□□□□□ -0.35
LMNTD1-202ENST00000413632 CREBZFQ9NS37 354 aa12.79□□□□□ -0.36
LMNTD1-202ENST00000413632 FARP1Q9Y4F1 1045 aaPredicted RBP12.78□□□□□ -0.36
LMNTD1-202ENST00000413632 C19orf67A6NJJ6 358 aa12.68□□□□□ -0.38
LMNTD1-202ENST00000413632 PLEKHG5O94827 1062 aa12.66□□□□□ -0.38
LMNTD1-202ENST00000413632 MIER1Q8N108 512 aa12.66□□□□□ -0.38
LMNTD1-202ENST00000413632 FBXO3Q9UK99 471 aa12.66□□□□□ -0.38
LMNTD1-202ENST00000413632 EVX2Q03828 476 aa12.64□□□□□ -0.39
LMNTD1-202ENST00000413632 NPM1P06748 294 aaKnown RBP eCLIP12.62□□□□□ -0.39
LMNTD1-202ENST00000413632 PLCD3Q8N3E9 789 aa12.62□□□□□ -0.39
LMNTD1-202ENST00000413632 CD44P16070 742 aaKnown RBP12.61□□□□□ -0.39
LMNTD1-202ENST00000413632 MNX1P50219 401 aaPredicted RBP12.6□□□□□ -0.39
LMNTD1-202ENST00000413632 PAK3O75914 559 aaPredicted RBP12.51□□□□□ -0.41
LMNTD1-202ENST00000413632 ZBTB47Q9UFB7 747 aaPredicted RBP12.51□□□□□ -0.41
LMNTD1-202ENST00000413632 ZRANB1Q9UGI0 708 aa12.49□□□□□ -0.41
LMNTD1-202ENST00000413632 VASPP50552 380 aaPredicted RBP12.47□□□□□ -0.41
LMNTD1-202ENST00000413632 ZNF579Q8NAF0 562 aaKnown RBP12.42□□□□□ -0.42
LMNTD1-202ENST00000413632 GABBR2O75899 941 aa12.41□□□□□ -0.42
LMNTD1-202ENST00000413632 TSPYL2Q9H2G4 693 aaPredicted RBP12.39□□□□□ -0.43
LMNTD1-202ENST00000413632 CLCN6P51797 869 aa12.37□□□□□ -0.43
LMNTD1-202ENST00000413632 RASEFQ8IZ41 740 aa12.36□□□□□ -0.43
LMNTD1-202ENST00000413632 KLHL34Q8N239 644 aa12.36□□□□□ -0.43
LMNTD1-202ENST00000413632 AMER1Q5JTC6 1135 aaPredicted RBP12.35□□□□□ -0.43
LMNTD1-202ENST00000413632 RTN4Q9NQC3 1192 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms