RNA–Protein interactions for RNA: ENST00000616326.1

USP50-205, Transcript of ubiquitin specific peptidase 50, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP50, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP50-205ENST00000616326 AEBP2Q6ZN18 517 aaPredicted RBP26.98■■□□□ 1.91
USP50-205ENST00000616326 CHIC1Q5VXU3 224 aa26.09■■□□□ 1.77
USP50-205ENST00000616326 PHF23Q9BUL5 403 aaPredicted RBP22.93■■□□□ 1.26
USP50-205ENST00000616326 SENP3Q9H4L4 574 aaPredicted RBP22.91■■□□□ 1.26
USP50-205ENST00000616326 FOXD1Q16676 465 aa21.3■■□□□ 1
USP50-205ENST00000616326 PLPPR3Q6T4P5 718 aa21.07■□□□□ 0.96
USP50-205ENST00000616326 PPP6R1Q9UPN7 881 aa20.33■□□□□ 0.84
USP50-205ENST00000616326 ADRA2BP18089 450 aa20.29■□□□□ 0.84
USP50-205ENST00000616326 PIAS4Q8N2W9 510 aaPredicted RBP20.03■□□□□ 0.8
USP50-205ENST00000616326 MSH5O43196 834 aa19.72■□□□□ 0.75
USP50-205ENST00000616326 POTEDQ86YR6 584 aa18.65■□□□□ 0.58
USP50-205ENST00000616326 PPP4R3CPQ6ZMV5 832 aa18.56■□□□□ 0.56
USP50-205ENST00000616326 SCAF1Q9H7N4 1312 aaKnown RBP18.54■□□□□ 0.56
USP50-205ENST00000616326 MAPK8IP2Q13387 824 aaPredicted RBP18.49■□□□□ 0.55
USP50-205ENST00000616326 DMRT2Q9Y5R5 561 aa18.24■□□□□ 0.51
USP50-205ENST00000616326 CNKSR2Q8WXI2 1034 aa18.07■□□□□ 0.48
USP50-205ENST00000616326 NCBP3Q53F19 620 aaKnown RBP17.98■□□□□ 0.47
USP50-205ENST00000616326 KCNA4P22459 653 aa17.86■□□□□ 0.45
USP50-205ENST00000616326 RNF216Q9NWF9 866 aaPredicted RBP17.78■□□□□ 0.44
USP50-205ENST00000616326 HOXD11P31277 338 aaPredicted RBP17.77■□□□□ 0.44
USP50-205ENST00000616326 NPM3O75607 178 aaKnown RBP17.73■□□□□ 0.43
USP50-205ENST00000616326 DCAF8L1A6NGE4 600 aa17.51■□□□□ 0.39
USP50-205ENST00000616326 DNAJC5BQ9UF47 199 aa17.2■□□□□ 0.34
USP50-205ENST00000616326 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.96■□□□□ 0.3
USP50-205ENST00000616326 SLC4A1APQ9BWU0 796 aaKnown RBP16.96■□□□□ 0.3
USP50-205ENST00000616326 RNF39Q9H2S5 420 aa16.88■□□□□ 0.29
USP50-205ENST00000616326 SLC4A2P04920 1241 aa16.8■□□□□ 0.28
USP50-205ENST00000616326 C1QBPQ07021 282 aaKnown RBP16.66■□□□□ 0.26
USP50-205ENST00000616326 U3KPZ7 1027 aaPredicted RBP16.65■□□□□ 0.26
USP50-205ENST00000616326 CACNB1Q02641 598 aaPredicted RBP16.63■□□□□ 0.25
USP50-205ENST00000616326 FOXD4L1Q9NU39 408 aa16.48■□□□□ 0.23
USP50-205ENST00000616326 ZBTB22O15209 634 aa16.43■□□□□ 0.22
USP50-205ENST00000616326 MYCNP04198 464 aaPredicted RBP16.37■□□□□ 0.21
USP50-205ENST00000616326 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.33■□□□□ 0.2
USP50-205ENST00000616326 HNRNPUL2Q1KMD3 747 aaKnown RBP16.33■□□□□ 0.2
USP50-205ENST00000616326 SPINK5Q9NQ38 1064 aaPredicted RBP16.28■□□□□ 0.2
USP50-205ENST00000616326 SAMD1Q6SPF0 538 aaPredicted RBP16.27■□□□□ 0.19
USP50-205ENST00000616326 CAPN15O75808 1086 aa16.21■□□□□ 0.19
USP50-205ENST00000616326 APLP2Q06481 763 aa16.21■□□□□ 0.19
USP50-205ENST00000616326 EHMT2Q96KQ7 1210 aa16.21■□□□□ 0.19
USP50-205ENST00000616326 CSRNP3Q8WYN3 585 aa16.13■□□□□ 0.17
USP50-205ENST00000616326 TRHP20396 242 aaPredicted RBP16.09■□□□□ 0.17
USP50-205ENST00000616326 ZNF219Q9P2Y4 722 aaPredicted RBP16.04■□□□□ 0.16
USP50-205ENST00000616326 DSG3P32926 999 aa15.99■□□□□ 0.15
USP50-205ENST00000616326 ATF5Q9Y2D1 282 aaPredicted RBP15.99■□□□□ 0.15
USP50-205ENST00000616326 ATXN8OSP0DMR3 200 aa15.92■□□□□ 0.14
USP50-205ENST00000616326 ABCB7O75027 752 aa15.89■□□□□ 0.13
USP50-205ENST00000616326 POLA2Q14181 598 aa15.77■□□□□ 0.11
USP50-205ENST00000616326 ZBTB12Q9Y330 459 aaPredicted RBP15.44■□□□□ 0.06
USP50-205ENST00000616326 FBLN2P98095 1184 aa15.31■□□□□ 0.04
USP50-205ENST00000616326 MKRN4PQ13434 485 aaPredicted RBP15.27■□□□□ 0.04
USP50-205ENST00000616326 OSCARQ8IYS5 282 aa15.24■□□□□ 0.03
USP50-205ENST00000616326 RBM42Q9BTD8 480 aaKnown RBP15.22■□□□□ 0.03
USP50-205ENST00000616326 SPDYE2BA6NHP3 402 aa15.02■□□□□ -0
USP50-205ENST00000616326 SPDYE6P0CI01 402 aa15.02■□□□□ -0
USP50-205ENST00000616326 SPDYE2Q495Y8 402 aa15.02■□□□□ -0
USP50-205ENST00000616326 AKT1S1Q96B36 256 aa14.99□□□□□ -0.01
USP50-205ENST00000616326 ZNF692Q9BU19 519 aaPredicted RBP14.95□□□□□ -0.02
USP50-205ENST00000616326 SSUH2Q9Y2M2 353 aa14.88□□□□□ -0.03
USP50-205ENST00000616326 REM2Q8IYK8 340 aaPredicted RBP14.86□□□□□ -0.03
USP50-205ENST00000616326 SPDYE4A6NLX3 237 aa14.81□□□□□ -0.04
USP50-205ENST00000616326 PABPN1Q86U42 306 aaKnown RBP eCLIP14.75□□□□□ -0.05
USP50-205ENST00000616326 PITPNM1O00562 1244 aa14.7□□□□□ -0.06
USP50-205ENST00000616326 CHRDL2Q6WN34 429 aa14.7□□□□□ -0.06
USP50-205ENST00000616326 SPDYE1Q8NFV5 336 aaPredicted RBP14.64□□□□□ -0.07
USP50-205ENST00000616326 CLEC11AQ9Y240 323 aa14.62□□□□□ -0.07
USP50-205ENST00000616326 POTEHQ6S545 545 aa14.61□□□□□ -0.07
USP50-205ENST00000616326 FKBP8Q14318 412 aa14.6□□□□□ -0.07
USP50-205ENST00000616326 PROM2Q8N271 834 aa14.5□□□□□ -0.09
USP50-205ENST00000616326 PIP4P2Q8N4L2 257 aa14.48□□□□□ -0.09
USP50-205ENST00000616326 FXR2P51116 673 aaKnown RBP eCLIP14.47□□□□□ -0.09
USP50-205ENST00000616326 PRR29P0C7W0 189 aa14.44□□□□□ -0.1
USP50-205ENST00000616326 STAG3Q9UJ98 1225 aa14.43□□□□□ -0.1
USP50-205ENST00000616326 PRKAR2AP13861 404 aaKnown RBP14.33□□□□□ -0.11
USP50-205ENST00000616326 CHADLQ6NUI6 762 aa14.29□□□□□ -0.12
USP50-205ENST00000616326 CREBZFQ9NS37 354 aa14.2□□□□□ -0.14
USP50-205ENST00000616326 FBXO3Q9UK99 471 aa14.12□□□□□ -0.15
USP50-205ENST00000616326 FARP1Q9Y4F1 1045 aaPredicted RBP14.11□□□□□ -0.15
USP50-205ENST00000616326 HAX1O00165 279 aa14.08□□□□□ -0.15
USP50-205ENST00000616326 MIER1Q8N108 512 aa14.07□□□□□ -0.16
USP50-205ENST00000616326 PLCD3Q8N3E9 789 aa14.03□□□□□ -0.16
USP50-205ENST00000616326 MNX1P50219 401 aaPredicted RBP14.02□□□□□ -0.16
USP50-205ENST00000616326 PLEKHG5O94827 1062 aa14□□□□□ -0.17
USP50-205ENST00000616326 C19orf67A6NJJ6 358 aa13.98□□□□□ -0.17
USP50-205ENST00000616326 EVX2Q03828 476 aa13.96□□□□□ -0.18
USP50-205ENST00000616326 NPM1P06748 294 aaKnown RBP eCLIP13.95□□□□□ -0.18
USP50-205ENST00000616326 VASPP50552 380 aaPredicted RBP13.95□□□□□ -0.18
USP50-205ENST00000616326 CD44P16070 742 aaKnown RBP13.9□□□□□ -0.18
USP50-205ENST00000616326 SP7Q8TDD2 431 aaPredicted RBP13.85□□□□□ -0.19
USP50-205ENST00000616326 ZBTB47Q9UFB7 747 aaPredicted RBP13.85□□□□□ -0.19
USP50-205ENST00000616326 ZRANB1Q9UGI0 708 aa13.8□□□□□ -0.2
USP50-205ENST00000616326 KLHL34Q8N239 644 aa13.79□□□□□ -0.2
USP50-205ENST00000616326 PAK3O75914 559 aaPredicted RBP13.77□□□□□ -0.21
USP50-205ENST00000616326 IFNLR1Q8IU57 520 aaPredicted RBP13.75□□□□□ -0.21
USP50-205ENST00000616326 RASEFQ8IZ41 740 aa13.74□□□□□ -0.21
USP50-205ENST00000616326 NUBP1P53384 320 aa13.73□□□□□ -0.21
USP50-205ENST00000616326 TSPYL2Q9H2G4 693 aaPredicted RBP13.73□□□□□ -0.21
USP50-205ENST00000616326 ZNF579Q8NAF0 562 aaKnown RBP13.7□□□□□ -0.22
USP50-205ENST00000616326 GABBR2O75899 941 aa13.66□□□□□ -0.22
USP50-205ENST00000616326 PHF12Q96QT6 1004 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms