RNA–Protein interactions for RNA: ENST00000516142.1

RN7SKP34-201, Transcript of RNA, 7SK small nuclear pseudogene 34, humanhuman

BASIC

Gene RN7SKP34, Length 244 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP34-201ENST00000516142 AEBP2Q6ZN18 517 aaPredicted RBP24.08■■□□□ 1.45
RN7SKP34-201ENST00000516142 CHIC1Q5VXU3 224 aa23.52■■□□□ 1.36
RN7SKP34-201ENST00000516142 PHF23Q9BUL5 403 aaPredicted RBP20.76■□□□□ 0.91
RN7SKP34-201ENST00000516142 SENP3Q9H4L4 574 aaPredicted RBP20.32■□□□□ 0.84
RN7SKP34-201ENST00000516142 PLPPR3Q6T4P5 718 aa19.08■□□□□ 0.64
RN7SKP34-201ENST00000516142 FOXD1Q16676 465 aa18.92■□□□□ 0.62
RN7SKP34-201ENST00000516142 PPP6R1Q9UPN7 881 aa18.3■□□□□ 0.52
RN7SKP34-201ENST00000516142 ADRA2BP18089 450 aa18.26■□□□□ 0.51
RN7SKP34-201ENST00000516142 PIAS4Q8N2W9 510 aaPredicted RBP17.8■□□□□ 0.44
RN7SKP34-201ENST00000516142 MSH5O43196 834 aa17.33■□□□□ 0.36
RN7SKP34-201ENST00000516142 PPP4R3CPQ6ZMV5 832 aa16.86■□□□□ 0.29
RN7SKP34-201ENST00000516142 POTEDQ86YR6 584 aa16.78■□□□□ 0.28
RN7SKP34-201ENST00000516142 SCAF1Q9H7N4 1312 aaKnown RBP16.59■□□□□ 0.25
RN7SKP34-201ENST00000516142 KCNA4P22459 653 aa16.57■□□□□ 0.24
RN7SKP34-201ENST00000516142 MAPK8IP2Q13387 824 aaPredicted RBP16.56■□□□□ 0.24
RN7SKP34-201ENST00000516142 NCBP3Q53F19 620 aaKnown RBP16.36■□□□□ 0.21
RN7SKP34-201ENST00000516142 CNKSR2Q8WXI2 1034 aa16.35■□□□□ 0.21
RN7SKP34-201ENST00000516142 DMRT2Q9Y5R5 561 aa16.27■□□□□ 0.2
RN7SKP34-201ENST00000516142 NPM3O75607 178 aaKnown RBP16.21■□□□□ 0.19
RN7SKP34-201ENST00000516142 RNF216Q9NWF9 866 aaPredicted RBP16.02■□□□□ 0.16
RN7SKP34-201ENST00000516142 HOXD11P31277 338 aaPredicted RBP15.97■□□□□ 0.15
RN7SKP34-201ENST00000516142 SLC4A1APQ9BWU0 796 aaKnown RBP15.74■□□□□ 0.11
RN7SKP34-201ENST00000516142 DNAJC5BQ9UF47 199 aa15.74■□□□□ 0.11
RN7SKP34-201ENST00000516142 DCAF8L1A6NGE4 600 aa15.49■□□□□ 0.07
RN7SKP34-201ENST00000516142 EHMT2Q96KQ7 1210 aa15.37■□□□□ 0.05
RN7SKP34-201ENST00000516142 SLC4A2P04920 1241 aa15.33■□□□□ 0.04
RN7SKP34-201ENST00000516142 ZBTB22O15209 634 aa15.29■□□□□ 0.04
RN7SKP34-201ENST00000516142 CSRNP3Q8WYN3 585 aa15.24■□□□□ 0.03
RN7SKP34-201ENST00000516142 FOXD4L1Q9NU39 408 aa15.18■□□□□ 0.02
RN7SKP34-201ENST00000516142 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.15■□□□□ 0.02
RN7SKP34-201ENST00000516142 U3KPZ7 1027 aaPredicted RBP14.99□□□□□ -0.01
RN7SKP34-201ENST00000516142 MYCNP04198 464 aaPredicted RBP14.93□□□□□ -0.02
RN7SKP34-201ENST00000516142 RNF39Q9H2S5 420 aa14.92□□□□□ -0.02
RN7SKP34-201ENST00000516142 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.71□□□□□ -0.05
RN7SKP34-201ENST00000516142 HNRNPUL2Q1KMD3 747 aaKnown RBP14.71□□□□□ -0.05
RN7SKP34-201ENST00000516142 C1QBPQ07021 282 aaKnown RBP14.7□□□□□ -0.06
RN7SKP34-201ENST00000516142 SAMD1Q6SPF0 538 aaPredicted RBP14.68□□□□□ -0.06
RN7SKP34-201ENST00000516142 ATXN8OSP0DMR3 200 aa14.63□□□□□ -0.07
RN7SKP34-201ENST00000516142 ATF5Q9Y2D1 282 aaPredicted RBP14.62□□□□□ -0.07
RN7SKP34-201ENST00000516142 SPINK5Q9NQ38 1064 aaPredicted RBP14.56□□□□□ -0.08
RN7SKP34-201ENST00000516142 APLP2Q06481 763 aa14.5□□□□□ -0.09
RN7SKP34-201ENST00000516142 CACNB1Q02641 598 aaPredicted RBP14.47□□□□□ -0.09
RN7SKP34-201ENST00000516142 CAPN15O75808 1086 aa14.42□□□□□ -0.1
RN7SKP34-201ENST00000516142 TRHP20396 242 aaPredicted RBP14.38□□□□□ -0.11
RN7SKP34-201ENST00000516142 ZNF219Q9P2Y4 722 aaPredicted RBP14.35□□□□□ -0.11
RN7SKP34-201ENST00000516142 DSG3P32926 999 aa14.23□□□□□ -0.13
RN7SKP34-201ENST00000516142 POLA2Q14181 598 aa14.2□□□□□ -0.14
RN7SKP34-201ENST00000516142 ABCB7O75027 752 aa14.19□□□□□ -0.14
RN7SKP34-201ENST00000516142 MKRN4PQ13434 485 aaPredicted RBP13.98□□□□□ -0.17
RN7SKP34-201ENST00000516142 ZBTB12Q9Y330 459 aaPredicted RBP13.87□□□□□ -0.19
RN7SKP34-201ENST00000516142 FBLN2P98095 1184 aa13.86□□□□□ -0.19
RN7SKP34-201ENST00000516142 FKBP8Q14318 412 aa13.71□□□□□ -0.21
RN7SKP34-201ENST00000516142 OSCARQ8IYS5 282 aa13.7□□□□□ -0.22
RN7SKP34-201ENST00000516142 SPDYE4A6NLX3 237 aa13.62□□□□□ -0.23
RN7SKP34-201ENST00000516142 SPDYE2BA6NHP3 402 aa13.56□□□□□ -0.24
RN7SKP34-201ENST00000516142 SPDYE6P0CI01 402 aa13.56□□□□□ -0.24
RN7SKP34-201ENST00000516142 SPDYE2Q495Y8 402 aa13.56□□□□□ -0.24
RN7SKP34-201ENST00000516142 ZNF692Q9BU19 519 aaPredicted RBP13.52□□□□□ -0.25
RN7SKP34-201ENST00000516142 SSUH2Q9Y2M2 353 aa13.5□□□□□ -0.25
RN7SKP34-201ENST00000516142 PROM2Q8N271 834 aa13.46□□□□□ -0.25
RN7SKP34-201ENST00000516142 RBM42Q9BTD8 480 aaKnown RBP13.46□□□□□ -0.25
RN7SKP34-201ENST00000516142 PABPN1Q86U42 306 aaKnown RBP eCLIP13.36□□□□□ -0.27
RN7SKP34-201ENST00000516142 AKT1S1Q96B36 256 aa13.35□□□□□ -0.27
RN7SKP34-201ENST00000516142 REM2Q8IYK8 340 aaPredicted RBP13.26□□□□□ -0.29
RN7SKP34-201ENST00000516142 FBXO3Q9UK99 471 aa13.14□□□□□ -0.31
RN7SKP34-201ENST00000516142 SPDYE1Q8NFV5 336 aaPredicted RBP13.13□□□□□ -0.31
RN7SKP34-201ENST00000516142 PITPNM1O00562 1244 aa13.1□□□□□ -0.31
RN7SKP34-201ENST00000516142 POTEHQ6S545 545 aa13.1□□□□□ -0.31
RN7SKP34-201ENST00000516142 STAG3Q9UJ98 1225 aa13.09□□□□□ -0.31
RN7SKP34-201ENST00000516142 CLEC11AQ9Y240 323 aa13.07□□□□□ -0.32
RN7SKP34-201ENST00000516142 VASPP50552 380 aaPredicted RBP13.02□□□□□ -0.33
RN7SKP34-201ENST00000516142 PRR29P0C7W0 189 aa12.96□□□□□ -0.33
RN7SKP34-201ENST00000516142 CHRDL2Q6WN34 429 aa12.93□□□□□ -0.34
RN7SKP34-201ENST00000516142 MIER1Q8N108 512 aa12.9□□□□□ -0.34
RN7SKP34-201ENST00000516142 IFNLR1Q8IU57 520 aaPredicted RBP12.89□□□□□ -0.35
RN7SKP34-201ENST00000516142 CREBZFQ9NS37 354 aa12.87□□□□□ -0.35
RN7SKP34-201ENST00000516142 PLCD3Q8N3E9 789 aa12.86□□□□□ -0.35
RN7SKP34-201ENST00000516142 FXR2P51116 673 aaKnown RBP eCLIP12.85□□□□□ -0.35
RN7SKP34-201ENST00000516142 PIP4P2Q8N4L2 257 aa12.81□□□□□ -0.36
RN7SKP34-201ENST00000516142 CHADLQ6NUI6 762 aa12.8□□□□□ -0.36
RN7SKP34-201ENST00000516142 MNX1P50219 401 aaPredicted RBP12.78□□□□□ -0.36
RN7SKP34-201ENST00000516142 PRKAR2AP13861 404 aaKnown RBP12.76□□□□□ -0.37
RN7SKP34-201ENST00000516142 PLEKHG5O94827 1062 aa12.73□□□□□ -0.37
RN7SKP34-201ENST00000516142 KLHL34Q8N239 644 aa12.73□□□□□ -0.37
RN7SKP34-201ENST00000516142 ZBTB47Q9UFB7 747 aaPredicted RBP12.67□□□□□ -0.38
RN7SKP34-201ENST00000516142 FARP1Q9Y4F1 1045 aaPredicted RBP12.67□□□□□ -0.38
RN7SKP34-201ENST00000516142 SPOCK2Q92563 424 aa12.66□□□□□ -0.38
RN7SKP34-201ENST00000516142 NUBP1P53384 320 aa12.62□□□□□ -0.39
RN7SKP34-201ENST00000516142 RTN4Q9NQC3 1192 aaKnown RBP12.61□□□□□ -0.39
RN7SKP34-201ENST00000516142 SLC24A1O60721 1099 aa12.58□□□□□ -0.4
RN7SKP34-201ENST00000516142 NPM1P06748 294 aaKnown RBP eCLIP12.57□□□□□ -0.4
RN7SKP34-201ENST00000516142 AMER1Q5JTC6 1135 aaPredicted RBP12.56□□□□□ -0.4
RN7SKP34-201ENST00000516142 RASEFQ8IZ41 740 aa12.55□□□□□ -0.4
RN7SKP34-201ENST00000516142 PKD2Q13563 968 aa12.49□□□□□ -0.41
RN7SKP34-201ENST00000516142 DCAF8Q5TAQ9 597 aa12.44□□□□□ -0.42
RN7SKP34-201ENST00000516142 CIZ1Q9ULV3 898 aaPredicted RBP12.44□□□□□ -0.42
RN7SKP34-201ENST00000516142 FAM212AQ96EL1 285 aa12.43□□□□□ -0.42
RN7SKP34-201ENST00000516142 GSE1Q14687 1217 aa12.42□□□□□ -0.42
RN7SKP34-201ENST00000516142 TSPYL2Q9H2G4 693 aaPredicted RBP12.42□□□□□ -0.42
RN7SKP34-201ENST00000516142 C19orf67A6NJJ6 358 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms