Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
HTTP42858 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HTTP42858 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
HTTP42858 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HTTP42858 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC6.7□□□□□ -1.34
HTTP42858 AL139805.2-201ENST00000455305 2433 ntBASIC6.7□□□□□ -1.34
HTTP42858 OTOG-202ENST00000399391 8778 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
HTTP42858 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
HTTP42858 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
HTTP42858 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
HTTP42858 RNA5SP350-201ENST00000363298 111 ntBASIC6.7□□□□□ -1.34
HTTP42858 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.7□□□□□ -1.34
HTTP42858 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.7□□□□□ -1.34
HTTP42858 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HTTP42858 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.7□□□□□ -1.34
HTTP42858 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HTTP42858 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.7□□□□□ -1.34
HTTP42858 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HTTP42858 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
HTTP42858 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
HTTP42858 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.69□□□□□ -1.34
HTTP42858 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC6.69□□□□□ -1.34
HTTP42858 AC009166.2-201ENST00000624410 2833 ntBASIC6.69□□□□□ -1.34
HTTP42858 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HTTP42858 BDP1-201ENST00000358731 11073 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
HTTP42858 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.69□□□□□ -1.34
HTTP42858 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC6.69□□□□□ -1.34
HTTP42858 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HTTP42858 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
HTTP42858 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HTTP42858 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
HTTP42858 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HTTP42858 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.69□□□□□ -1.34
HTTP42858 AC005297.1-201ENST00000444765 862 ntBASIC6.69□□□□□ -1.34
HTTP42858 PGAM1P13-201ENST00000507497 754 ntBASIC6.69□□□□□ -1.34
HTTP42858 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.69□□□□□ -1.34
HTTP42858 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.69□□□□□ -1.34
HTTP42858 AC104785.1-201ENST00000603220 588 ntBASIC6.69□□□□□ -1.34
HTTP42858 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC6.69□□□□□ -1.34
HTTP42858 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HTTP42858 TIAM2-203ENST00000360366 5771 ntTSL 5 BASIC6.69□□□□□ -1.34
HTTP42858 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HTTP42858 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
HTTP42858 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HTTP42858 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HTTP42858 ZBTB39-201ENST00000300101 6170 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HTTP42858 MIR223-201ENST00000385204 110 ntBASIC6.69□□□□□ -1.34
HTTP42858 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
HTTP42858 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC6.69□□□□□ -1.34
HTTP42858 CYP4F32P-201ENST00000426492 504 ntBASIC6.69□□□□□ -1.34
HTTP42858 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.69□□□□□ -1.34
HTTP42858 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.69□□□□□ -1.34
HTTP42858 RPEP1-201ENST00000504507 658 ntBASIC6.69□□□□□ -1.34
HTTP42858 AC126177.5-201ENST00000549599 178 ntBASIC6.69□□□□□ -1.34
HTTP42858 AL359704.2-201ENST00000604335 521 ntBASIC6.69□□□□□ -1.34
HTTP42858 AC008115.3-201ENST00000614874 549 ntBASIC6.69□□□□□ -1.34
HTTP42858 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HTTP42858 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC6.69□□□□□ -1.34
HTTP42858 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HTTP42858 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
HTTP42858 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HTTP42858 NRP1-208ENST00000395995 5826 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HTTP42858 AC105114.1-201ENST00000624795 1862 ntBASIC6.68□□□□□ -1.34
HTTP42858 OR2M1P-201ENST00000318104 951 ntBASIC6.68□□□□□ -1.34
HTTP42858 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.68□□□□□ -1.34
HTTP42858 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.68□□□□□ -1.34
HTTP42858 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HTTP42858 AL589647.1-201ENST00000402485 466 ntBASIC6.68□□□□□ -1.34
HTTP42858 AL139128.1-201ENST00000413921 941 ntBASIC6.68□□□□□ -1.34
HTTP42858 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.68□□□□□ -1.34
HTTP42858 RPEL1-201ENST00000441178 2130 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
HTTP42858 AURKAPS1-201ENST00000451805 1212 ntBASIC6.68□□□□□ -1.34
HTTP42858 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.68□□□□□ -1.34
HTTP42858 SNORA58-201ENST00000505219 137 ntBASIC6.68□□□□□ -1.34
HTTP42858 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.68□□□□□ -1.34
HTTP42858 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HTTP42858 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HTTP42858 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HTTP42858 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.68□□□□□ -1.34
HTTP42858 ZNF442-201ENST00000242804 6219 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
HTTP42858 DOK6-201ENST00000382713 8890 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HTTP42858 CTDSPL2-201ENST00000260327 6828 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HTTP42858 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.68□□□□□ -1.34
HTTP42858 AC005261.2-201ENST00000593427 4258 ntBASIC6.68□□□□□ -1.34
HTTP42858 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
HTTP42858 ARHGEF9-222ENST00000636048 5059 ntTSL 5 BASIC6.68□□□□□ -1.34
HTTP42858 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
HTTP42858 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
HTTP42858 AL159987.1-201ENST00000347911 293 ntBASIC6.68□□□□□ -1.34
HTTP42858 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.68□□□□□ -1.34
HTTP42858 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.68□□□□□ -1.34
HTTP42858 AC099521.1-201ENST00000482557 334 ntBASIC6.68□□□□□ -1.34
HTTP42858 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.68□□□□□ -1.34
HTTP42858 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.68□□□□□ -1.34
HTTP42858 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.68□□□□□ -1.34
HTTP42858 DYNC1I2P1-201ENST00000435916 1838 ntBASIC6.68□□□□□ -1.34
HTTP42858 CNTN4-205ENST00000427331 4980 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
HTTP42858 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HTTP42858 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
HTTP42858 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms