RNA–Protein interactions for RNA: ENST00000390431.3

TRAV9-1-201, Transcript of T cell receptor alpha variable 9-1, humanhuman

APPRIS P1 BASIC

Gene TRAV9-1, Length 338 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1-201ENST00000390431 AEBP2Q6ZN18 517 aaPredicted RBP22.42■■□□□ 1.18
TRAV9-1-201ENST00000390431 CHIC1Q5VXU3 224 aa21.31■■□□□ 1
TRAV9-1-201ENST00000390431 SENP3Q9H4L4 574 aaPredicted RBP19.06■□□□□ 0.64
TRAV9-1-201ENST00000390431 PHF23Q9BUL5 403 aaPredicted RBP18.85■□□□□ 0.61
TRAV9-1-201ENST00000390431 FOXD1Q16676 465 aa17.79■□□□□ 0.44
TRAV9-1-201ENST00000390431 PLPPR3Q6T4P5 718 aa17.05■□□□□ 0.32
TRAV9-1-201ENST00000390431 PPP6R1Q9UPN7 881 aa16.71■□□□□ 0.27
TRAV9-1-201ENST00000390431 ADRA2BP18089 450 aa16.68■□□□□ 0.26
TRAV9-1-201ENST00000390431 PIAS4Q8N2W9 510 aaPredicted RBP16.66■□□□□ 0.26
TRAV9-1-201ENST00000390431 MSH5O43196 834 aa16.58■□□□□ 0.24
TRAV9-1-201ENST00000390431 POTEDQ86YR6 584 aa16.11■□□□□ 0.17
TRAV9-1-201ENST00000390431 MAPK8IP2Q13387 824 aaPredicted RBP15.31■□□□□ 0.04
TRAV9-1-201ENST00000390431 SCAF1Q9H7N4 1312 aaKnown RBP15.17■□□□□ 0.02
TRAV9-1-201ENST00000390431 DMRT2Q9Y5R5 561 aa15.13■□□□□ 0.01
TRAV9-1-201ENST00000390431 PPP4R3CPQ6ZMV5 832 aa14.98□□□□□ -0.01
TRAV9-1-201ENST00000390431 CNKSR2Q8WXI2 1034 aa14.65□□□□□ -0.06
TRAV9-1-201ENST00000390431 DCAF8L1A6NGE4 600 aa14.6□□□□□ -0.07
TRAV9-1-201ENST00000390431 HOXD11P31277 338 aaPredicted RBP14.58□□□□□ -0.08
TRAV9-1-201ENST00000390431 RNF216Q9NWF9 866 aaPredicted RBP14.5□□□□□ -0.09
TRAV9-1-201ENST00000390431 NCBP3Q53F19 620 aaKnown RBP14.4□□□□□ -0.1
TRAV9-1-201ENST00000390431 CACNB1Q02641 598 aaPredicted RBP14.24□□□□□ -0.13
TRAV9-1-201ENST00000390431 NPM3O75607 178 aaKnown RBP14.23□□□□□ -0.13
TRAV9-1-201ENST00000390431 RNF39Q9H2S5 420 aa14.17□□□□□ -0.14
TRAV9-1-201ENST00000390431 KCNA4P22459 653 aa14.05□□□□□ -0.16
TRAV9-1-201ENST00000390431 DNAJC5BQ9UF47 199 aa13.98□□□□□ -0.17
TRAV9-1-201ENST00000390431 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.95□□□□□ -0.18
TRAV9-1-201ENST00000390431 C1QBPQ07021 282 aaKnown RBP13.94□□□□□ -0.18
TRAV9-1-201ENST00000390431 U3KPZ7 1027 aaPredicted RBP13.67□□□□□ -0.22
TRAV9-1-201ENST00000390431 NISCHQ9Y2I1 1504 aa13.64□□□□□ -0.23
TRAV9-1-201ENST00000390431 SLC4A2P04920 1241 aa13.57□□□□□ -0.24
TRAV9-1-201ENST00000390431 SPINK5Q9NQ38 1064 aaPredicted RBP13.48□□□□□ -0.25
TRAV9-1-201ENST00000390431 CAPN15O75808 1086 aa13.45□□□□□ -0.26
TRAV9-1-201ENST00000390431 DSG3P32926 999 aa13.31□□□□□ -0.28
TRAV9-1-201ENST00000390431 TRHP20396 242 aaPredicted RBP13.26□□□□□ -0.29
TRAV9-1-201ENST00000390431 SLC4A1APQ9BWU0 796 aaKnown RBP13.26□□□□□ -0.29
TRAV9-1-201ENST00000390431 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.24□□□□□ -0.29
TRAV9-1-201ENST00000390431 HNRNPUL2Q1KMD3 747 aaKnown RBP13.24□□□□□ -0.29
TRAV9-1-201ENST00000390431 APLP2Q06481 763 aa13.22□□□□□ -0.29
TRAV9-1-201ENST00000390431 SAMD1Q6SPF0 538 aaPredicted RBP13.18□□□□□ -0.3
TRAV9-1-201ENST00000390431 ABCB7O75027 752 aa13.17□□□□□ -0.3
TRAV9-1-201ENST00000390431 ZNF219Q9P2Y4 722 aaPredicted RBP13.17□□□□□ -0.3
TRAV9-1-201ENST00000390431 MYCNP04198 464 aaPredicted RBP13.14□□□□□ -0.31
TRAV9-1-201ENST00000390431 FOXD4L1Q9NU39 408 aa13.06□□□□□ -0.32
TRAV9-1-201ENST00000390431 ZBTB22O15209 634 aa12.92□□□□□ -0.34
TRAV9-1-201ENST00000390431 POLA2Q14181 598 aa12.88□□□□□ -0.35
TRAV9-1-201ENST00000390431 ATF5Q9Y2D1 282 aaPredicted RBP12.88□□□□□ -0.35
TRAV9-1-201ENST00000390431 RBM42Q9BTD8 480 aaKnown RBP12.66□□□□□ -0.38
TRAV9-1-201ENST00000390431 POTEHQ6S545 545 aa12.64□□□□□ -0.39
TRAV9-1-201ENST00000390431 ATXN8OSP0DMR3 200 aa12.57□□□□□ -0.4
TRAV9-1-201ENST00000390431 ZBTB12Q9Y330 459 aaPredicted RBP12.57□□□□□ -0.4
TRAV9-1-201ENST00000390431 OSCARQ8IYS5 282 aa12.51□□□□□ -0.41
TRAV9-1-201ENST00000390431 CHRDL2Q6WN34 429 aa12.39□□□□□ -0.43
TRAV9-1-201ENST00000390431 AKT1S1Q96B36 256 aa12.39□□□□□ -0.43
TRAV9-1-201ENST00000390431 CSRNP3Q8WYN3 585 aa12.37□□□□□ -0.43
TRAV9-1-201ENST00000390431 FBLN2P98095 1184 aa12.33□□□□□ -0.44
TRAV9-1-201ENST00000390431 EHMT2Q96KQ7 1210 aa12.33□□□□□ -0.44
TRAV9-1-201ENST00000390431 REM2Q8IYK8 340 aaPredicted RBP12.31□□□□□ -0.44
TRAV9-1-201ENST00000390431 MKRN4PQ13434 485 aaPredicted RBP12.28□□□□□ -0.44
TRAV9-1-201ENST00000390431 CCDC180Q9P1Z9 1646 aa12.21□□□□□ -0.46
TRAV9-1-201ENST00000390431 SPDYE2BA6NHP3 402 aa12.2□□□□□ -0.46
TRAV9-1-201ENST00000390431 PITPNM1O00562 1244 aa12.2□□□□□ -0.46
TRAV9-1-201ENST00000390431 SPDYE6P0CI01 402 aa12.2□□□□□ -0.46
TRAV9-1-201ENST00000390431 SPDYE2Q495Y8 402 aa12.2□□□□□ -0.46
TRAV9-1-201ENST00000390431 PIP4P2Q8N4L2 257 aa12.12□□□□□ -0.47
TRAV9-1-201ENST00000390431 ZNF692Q9BU19 519 aaPredicted RBP12.11□□□□□ -0.47
TRAV9-1-201ENST00000390431 ABCC9O60706 1549 aa12.06□□□□□ -0.48
TRAV9-1-201ENST00000390431 SSUH2Q9Y2M2 353 aa12.05□□□□□ -0.48
TRAV9-1-201ENST00000390431 FXR2P51116 673 aaKnown RBP eCLIP12.03□□□□□ -0.48
TRAV9-1-201ENST00000390431 CLEC11AQ9Y240 323 aa12.03□□□□□ -0.48
TRAV9-1-201ENST00000390431 SPDYE1Q8NFV5 336 aaPredicted RBP11.99□□□□□ -0.49
TRAV9-1-201ENST00000390431 PABPN1Q86U42 306 aaKnown RBP eCLIP11.95□□□□□ -0.5
TRAV9-1-201ENST00000390431 HAX1O00165 279 aa11.9□□□□□ -0.5
TRAV9-1-201ENST00000390431 PRKAR2AP13861 404 aaKnown RBP11.88□□□□□ -0.51
TRAV9-1-201ENST00000390431 SP7Q8TDD2 431 aaPredicted RBP11.87□□□□□ -0.51
TRAV9-1-201ENST00000390431 CHADLQ6NUI6 762 aa11.81□□□□□ -0.52
TRAV9-1-201ENST00000390431 PRR29P0C7W0 189 aa11.8□□□□□ -0.52
TRAV9-1-201ENST00000390431 EVX2Q03828 476 aa11.77□□□□□ -0.53
TRAV9-1-201ENST00000390431 SPDYE4A6NLX3 237 aa11.73□□□□□ -0.53
TRAV9-1-201ENST00000390431 C19orf67A6NJJ6 358 aa11.65□□□□□ -0.54
TRAV9-1-201ENST00000390431 FARP1Q9Y4F1 1045 aaPredicted RBP11.58□□□□□ -0.56
TRAV9-1-201ENST00000390431 RB1CC1Q8TDY2 1594 aa11.56□□□□□ -0.56
TRAV9-1-201ENST00000390431 STAG3Q9UJ98 1225 aa11.56□□□□□ -0.56
TRAV9-1-201ENST00000390431 NACADO15069 1562 aa11.53□□□□□ -0.56
TRAV9-1-201ENST00000390431 CD44P16070 742 aaKnown RBP11.52□□□□□ -0.57
TRAV9-1-201ENST00000390431 CREBZFQ9NS37 354 aa11.52□□□□□ -0.57
TRAV9-1-201ENST00000390431 GABBR2O75899 941 aa11.48□□□□□ -0.57
TRAV9-1-201ENST00000390431 MYO15BQ96JP2 1530 aa11.45□□□□□ -0.58
TRAV9-1-201ENST00000390431 PROM2Q8N271 834 aa11.39□□□□□ -0.59
TRAV9-1-201ENST00000390431 ZRANB1Q9UGI0 708 aa11.36□□□□□ -0.59
TRAV9-1-201ENST00000390431 DCAF8L2P0C7V8 631 aa11.35□□□□□ -0.59
TRAV9-1-201ENST00000390431 ZCCHC6Q5VYS8 1495 aaKnown RBP11.33□□□□□ -0.6
TRAV9-1-201ENST00000390431 DCAF1Q9Y4B6 1507 aa11.33□□□□□ -0.6
TRAV9-1-201ENST00000390431 MNX1P50219 401 aaPredicted RBP11.31□□□□□ -0.6
TRAV9-1-201ENST00000390431 ZNF579Q8NAF0 562 aaKnown RBP11.3□□□□□ -0.6
TRAV9-1-201ENST00000390431 NPM1P06748 294 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRAV9-1-201ENST00000390431 UNC13AQ9UPW8 1703 aa11.28□□□□□ -0.6
TRAV9-1-201ENST00000390431 PAK3O75914 559 aaPredicted RBP11.26□□□□□ -0.61
TRAV9-1-201ENST00000390431 POTEIP0CG38 1075 aa11.26□□□□□ -0.61
TRAV9-1-201ENST00000390431 FKBP8Q14318 412 aa11.26□□□□□ -0.61
TRAV9-1-201ENST00000390431 PHF12Q96QT6 1004 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms