Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 MTCYBP18-201ENST00000501056 747 ntBASIC10.72□□□□□ -0.69
PHF8Q9UPP1 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 MCC-209ENST00000515367 3844 ntTSL 5 BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 RN7SKP298-201ENST00000515950 94 ntBASIC10.72□□□□□ -0.69
PHF8Q9UPP1 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 OR4C1P-201ENST00000530880 937 ntBASIC10.72□□□□□ -0.69
PHF8Q9UPP1 OR4A40P-201ENST00000533878 948 ntBASIC10.72□□□□□ -0.69
PHF8Q9UPP1 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 ARGFXP2-201ENST00000579304 949 ntBASIC10.72□□□□□ -0.69
PHF8Q9UPP1 SYPL1P2-201ENST00000582878 727 ntBASIC10.72□□□□□ -0.69
PHF8Q9UPP1 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC10.72□□□□□ -0.69
PHF8Q9UPP1 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 KRT7-214ENST00000638501 398 ntTSL 5 BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 FAM193A-204ENST00000505311 4110 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 AC125238.2-201ENST00000430003 1440 ntBASIC10.72□□□□□ -0.69
PHF8Q9UPP1 LINC01278-205ENST00000609401 2886 ntTSL 2 BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 ACER3-212ENST00000532485 7378 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 DAB2-201ENST00000320816 4534 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 SPTBN1-201ENST00000333896 9075 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 EPB41L2-221ENST00000529208 3023 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 AC026124.1-201ENST00000545709 3457 ntTSL 5 BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 TRHDE-201ENST00000261180 10733 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 PBLD-202ENST00000309049 2165 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 RIPOR2-202ENST00000378023 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
PHF8Q9UPP1 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
PHF8Q9UPP1 MCM3-207ENST00000616552 3208 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
PHF8Q9UPP1 GABRP-201ENST00000265294 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
PHF8Q9UPP1 AC005722.2-201ENST00000577087 3370 ntBASIC10.71□□□□□ -0.69
PHF8Q9UPP1 CLIP1-218ENST00000545889 4633 ntTSL 5 BASIC10.71□□□□□ -0.69
PHF8Q9UPP1 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
PHF8Q9UPP1 IL6STP1-201ENST00000346911 1020 ntBASIC10.71□□□□□ -0.69
PHF8Q9UPP1 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
PHF8Q9UPP1 Y_RNA.38-201ENST00000362617 102 ntBASIC10.71□□□□□ -0.69
PHF8Q9UPP1 ARHGEF11-202ENST00000368194 6889 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
PHF8Q9UPP1 AC113608.1-201ENST00000398740 305 ntBASIC10.71□□□□□ -0.69
PHF8Q9UPP1 DPY19L1P1-201ENST00000417811 2594 ntBASIC10.71□□□□□ -0.69
PHF8Q9UPP1 SH3BP5-AS1-202ENST00000420195 5570 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
PHF8Q9UPP1 PGAM1P3-201ENST00000420790 565 ntBASIC10.71□□□□□ -0.69
PHF8Q9UPP1 VEZF1P1-201ENST00000423931 1541 ntBASIC10.71□□□□□ -0.69
PHF8Q9UPP1 PNRC2P1-201ENST00000423940 420 ntBASIC10.71□□□□□ -0.69
PHF8Q9UPP1 MAP3K13-203ENST00000424227 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
PHF8Q9UPP1 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
PHF8Q9UPP1 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC10.71□□□□□ -0.69
PHF8Q9UPP1 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC10.71□□□□□ -0.69
PHF8Q9UPP1 GAS5-211ENST00000432536 959 ntTSL 2 BASIC10.71□□□□□ -0.69
PHF8Q9UPP1 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC10.71□□□□□ -0.69
PHF8Q9UPP1 AL592114.2-201ENST00000440142 532 ntBASIC10.71□□□□□ -0.69
PHF8Q9UPP1 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC10.71□□□□□ -0.69
PHF8Q9UPP1 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC10.71□□□□□ -0.69
PHF8Q9UPP1 MRPS21P1-201ENST00000453850 223 ntBASIC10.71□□□□□ -0.69
PHF8Q9UPP1 CHIAP1-201ENST00000456220 995 ntBASIC10.71□□□□□ -0.69
PHF8Q9UPP1 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC10.71□□□□□ -0.69
PHF8Q9UPP1 AC004890.1-201ENST00000461005 181 ntBASIC10.71□□□□□ -0.69
PHF8Q9UPP1 AC011979.1-201ENST00000472300 483 ntBASIC10.71□□□□□ -0.69
PHF8Q9UPP1 AC084024.2-201ENST00000503480 791 ntBASIC10.71□□□□□ -0.69
PHF8Q9UPP1 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC10.71□□□□□ -0.69
PHF8Q9UPP1 SETP21-201ENST00000514799 892 ntBASIC10.71□□□□□ -0.69
PHF8Q9UPP1 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC10.71□□□□□ -0.69
PHF8Q9UPP1 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
PHF8Q9UPP1 OR11J2P-201ENST00000555298 907 ntBASIC10.71□□□□□ -0.69
PHF8Q9UPP1 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
PHF8Q9UPP1 UBE2CP4-201ENST00000561405 535 ntBASIC10.71□□□□□ -0.69
PHF8Q9UPP1 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC10.71□□□□□ -0.69
PHF8Q9UPP1 RN7SL473P-201ENST00000580341 299 ntBASIC10.71□□□□□ -0.69
PHF8Q9UPP1 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC10.71□□□□□ -0.69
PHF8Q9UPP1 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC10.71□□□□□ -0.69
PHF8Q9UPP1 AC012360.2-201ENST00000609349 391 ntBASIC10.71□□□□□ -0.69
PHF8Q9UPP1 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
PHF8Q9UPP1 MIR8075-201ENST00000614354 80 ntBASIC10.71□□□□□ -0.69
PHF8Q9UPP1 AP005060.1-201ENST00000623868 3174 ntBASIC10.71□□□□□ -0.69
PHF8Q9UPP1 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC10.71□□□□□ -0.69
PHF8Q9UPP1 HPS4-203ENST00000402105 3562 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
PHF8Q9UPP1 PABPC3-201ENST00000281589 3387 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
PHF8Q9UPP1 GJC1-201ENST00000330514 3295 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
PHF8Q9UPP1 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
PHF8Q9UPP1 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
PHF8Q9UPP1 NECAP1-201ENST00000339754 2593 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
PHF8Q9UPP1 COL4A6-201ENST00000334504 6700 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
PHF8Q9UPP1 FGFR2-206ENST00000358487 4255 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PHF8Q9UPP1 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC10.7□□□□□ -0.7
PHF8Q9UPP1 ANO2-202ENST00000356134 3717 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
PHF8Q9UPP1 GSK3A-202ENST00000398249 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
PHF8Q9UPP1 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
PHF8Q9UPP1 AC003684.1-201ENST00000432442 1715 ntTSL 2 BASIC10.7□□□□□ -0.7
PHF8Q9UPP1 LINC02292-201ENST00000554522 1701 ntTSL 2 BASIC10.7□□□□□ -0.7
PHF8Q9UPP1 AMPH-202ENST00000356264 3418 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
PHF8Q9UPP1 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
PHF8Q9UPP1 BBS12-201ENST00000314218 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms