RNA–Protein interactions for RNA: ENST00000447405.1

AP000477.2-201, humanhuman

TSL 3 BASIC

Gene AP000477.2, Length 778 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000477.2-201ENST00000447405 AEBP2Q6ZN18 517 aaPredicted RBP22.9■■□□□ 1.26
AP000477.2-201ENST00000447405 CHIC1Q5VXU3 224 aa21.97■■□□□ 1.11
AP000477.2-201ENST00000447405 PHF23Q9BUL5 403 aaPredicted RBP19.38■□□□□ 0.69
AP000477.2-201ENST00000447405 SENP3Q9H4L4 574 aaPredicted RBP19.36■□□□□ 0.69
AP000477.2-201ENST00000447405 FOXD1Q16676 465 aa18.11■□□□□ 0.49
AP000477.2-201ENST00000447405 PLPPR3Q6T4P5 718 aa17.68■□□□□ 0.42
AP000477.2-201ENST00000447405 PPP6R1Q9UPN7 881 aa17.25■□□□□ 0.35
AP000477.2-201ENST00000447405 ADRA2BP18089 450 aa17.23■□□□□ 0.35
AP000477.2-201ENST00000447405 PIAS4Q8N2W9 510 aaPredicted RBP17■□□□□ 0.31
AP000477.2-201ENST00000447405 POTEDQ86YR6 584 aa16.8■□□□□ 0.28
AP000477.2-201ENST00000447405 MSH5O43196 834 aa16.69■□□□□ 0.26
AP000477.2-201ENST00000447405 MAPK8IP2Q13387 824 aaPredicted RBP15.77■□□□□ 0.12
AP000477.2-201ENST00000447405 PPP4R3CPQ6ZMV5 832 aa15.62■□□□□ 0.09
AP000477.2-201ENST00000447405 SCAF1Q9H7N4 1312 aaKnown RBP15.6■□□□□ 0.09
AP000477.2-201ENST00000447405 DMRT2Q9Y5R5 561 aa15.42■□□□□ 0.06
AP000477.2-201ENST00000447405 CNKSR2Q8WXI2 1034 aa15.18■□□□□ 0.02
AP000477.2-201ENST00000447405 NCBP3Q53F19 620 aaKnown RBP15.04■□□□□ -0
AP000477.2-201ENST00000447405 DCAF8L1A6NGE4 600 aa14.96□□□□□ -0.01
AP000477.2-201ENST00000447405 KCNA4P22459 653 aa14.96□□□□□ -0.01
AP000477.2-201ENST00000447405 HOXD11P31277 338 aaPredicted RBP14.95□□□□□ -0.02
AP000477.2-201ENST00000447405 RNF216Q9NWF9 866 aaPredicted RBP14.93□□□□□ -0.02
AP000477.2-201ENST00000447405 NPM3O75607 178 aaKnown RBP14.89□□□□□ -0.03
AP000477.2-201ENST00000447405 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.37□□□□□ -0.11
AP000477.2-201ENST00000447405 RNF39Q9H2S5 420 aa14.32□□□□□ -0.12
AP000477.2-201ENST00000447405 CACNB1Q02641 598 aaPredicted RBP14.26□□□□□ -0.13
AP000477.2-201ENST00000447405 DNAJC5BQ9UF47 199 aa14.24□□□□□ -0.13
AP000477.2-201ENST00000447405 SLC4A1APQ9BWU0 796 aaKnown RBP14.16□□□□□ -0.14
AP000477.2-201ENST00000447405 SLC4A2P04920 1241 aa14.15□□□□□ -0.14
AP000477.2-201ENST00000447405 C1QBPQ07021 282 aaKnown RBP14.09□□□□□ -0.15
AP000477.2-201ENST00000447405 U3KPZ7 1027 aaPredicted RBP14.07□□□□□ -0.16
AP000477.2-201ENST00000447405 SPINK5Q9NQ38 1064 aaPredicted RBP13.84□□□□□ -0.19
AP000477.2-201ENST00000447405 CAPN15O75808 1086 aa13.79□□□□□ -0.2
AP000477.2-201ENST00000447405 ZBTB22O15209 634 aa13.77□□□□□ -0.21
AP000477.2-201ENST00000447405 FOXD4L1Q9NU39 408 aa13.76□□□□□ -0.21
AP000477.2-201ENST00000447405 MYCNP04198 464 aaPredicted RBP13.69□□□□□ -0.22
AP000477.2-201ENST00000447405 TRHP20396 242 aaPredicted RBP13.68□□□□□ -0.22
AP000477.2-201ENST00000447405 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.66□□□□□ -0.22
AP000477.2-201ENST00000447405 HNRNPUL2Q1KMD3 747 aaKnown RBP13.66□□□□□ -0.22
AP000477.2-201ENST00000447405 SAMD1Q6SPF0 538 aaPredicted RBP13.63□□□□□ -0.23
AP000477.2-201ENST00000447405 DSG3P32926 999 aa13.56□□□□□ -0.24
AP000477.2-201ENST00000447405 APLP2Q06481 763 aa13.56□□□□□ -0.24
AP000477.2-201ENST00000447405 ABCB7O75027 752 aa13.55□□□□□ -0.24
AP000477.2-201ENST00000447405 EHMT2Q96KQ7 1210 aa13.53□□□□□ -0.24
AP000477.2-201ENST00000447405 ATF5Q9Y2D1 282 aaPredicted RBP13.51□□□□□ -0.25
AP000477.2-201ENST00000447405 ZNF219Q9P2Y4 722 aaPredicted RBP13.49□□□□□ -0.25
AP000477.2-201ENST00000447405 CSRNP3Q8WYN3 585 aa13.42□□□□□ -0.26
AP000477.2-201ENST00000447405 POLA2Q14181 598 aa13.35□□□□□ -0.27
AP000477.2-201ENST00000447405 ATXN8OSP0DMR3 200 aa13.21□□□□□ -0.29
AP000477.2-201ENST00000447405 POTEHQ6S545 545 aa13.04□□□□□ -0.32
AP000477.2-201ENST00000447405 ZBTB12Q9Y330 459 aaPredicted RBP12.93□□□□□ -0.34
AP000477.2-201ENST00000447405 OSCARQ8IYS5 282 aa12.9□□□□□ -0.34
AP000477.2-201ENST00000447405 MKRN4PQ13434 485 aaPredicted RBP12.85□□□□□ -0.35
AP000477.2-201ENST00000447405 FBLN2P98095 1184 aa12.84□□□□□ -0.35
AP000477.2-201ENST00000447405 RBM42Q9BTD8 480 aaKnown RBP12.83□□□□□ -0.36
AP000477.2-201ENST00000447405 AKT1S1Q96B36 256 aa12.64□□□□□ -0.39
AP000477.2-201ENST00000447405 ZNF692Q9BU19 519 aaPredicted RBP12.61□□□□□ -0.39
AP000477.2-201ENST00000447405 SPDYE2BA6NHP3 402 aa12.6□□□□□ -0.39
AP000477.2-201ENST00000447405 SPDYE6P0CI01 402 aa12.6□□□□□ -0.39
AP000477.2-201ENST00000447405 SPDYE2Q495Y8 402 aa12.6□□□□□ -0.39
AP000477.2-201ENST00000447405 REM2Q8IYK8 340 aaPredicted RBP12.6□□□□□ -0.39
AP000477.2-201ENST00000447405 CHRDL2Q6WN34 429 aa12.52□□□□□ -0.41
AP000477.2-201ENST00000447405 PITPNM1O00562 1244 aa12.47□□□□□ -0.41
AP000477.2-201ENST00000447405 SSUH2Q9Y2M2 353 aa12.47□□□□□ -0.41
AP000477.2-201ENST00000447405 PABPN1Q86U42 306 aaKnown RBP eCLIP12.45□□□□□ -0.42
AP000477.2-201ENST00000447405 CLEC11AQ9Y240 323 aa12.43□□□□□ -0.42
AP000477.2-201ENST00000447405 SPDYE4A6NLX3 237 aa12.4□□□□□ -0.42
AP000477.2-201ENST00000447405 SPDYE1Q8NFV5 336 aaPredicted RBP12.33□□□□□ -0.44
AP000477.2-201ENST00000447405 PIP4P2Q8N4L2 257 aa12.31□□□□□ -0.44
AP000477.2-201ENST00000447405 FXR2P51116 673 aaKnown RBP eCLIP12.23□□□□□ -0.45
AP000477.2-201ENST00000447405 PRR29P0C7W0 189 aa12.21□□□□□ -0.45
AP000477.2-201ENST00000447405 FKBP8Q14318 412 aa12.18□□□□□ -0.46
AP000477.2-201ENST00000447405 CHADLQ6NUI6 762 aa12.18□□□□□ -0.46
AP000477.2-201ENST00000447405 PRKAR2AP13861 404 aaKnown RBP12.17□□□□□ -0.46
AP000477.2-201ENST00000447405 HAX1O00165 279 aa12.06□□□□□ -0.48
AP000477.2-201ENST00000447405 STAG3Q9UJ98 1225 aa12.04□□□□□ -0.48
AP000477.2-201ENST00000447405 PROM2Q8N271 834 aa12.02□□□□□ -0.49
AP000477.2-201ENST00000447405 EVX2Q03828 476 aa11.97□□□□□ -0.49
AP000477.2-201ENST00000447405 CREBZFQ9NS37 354 aa11.96□□□□□ -0.49
AP000477.2-201ENST00000447405 FARP1Q9Y4F1 1045 aaPredicted RBP11.93□□□□□ -0.5
AP000477.2-201ENST00000447405 SP7Q8TDD2 431 aaPredicted RBP11.87□□□□□ -0.51
AP000477.2-201ENST00000447405 MIER1Q8N108 512 aa11.85□□□□□ -0.51
AP000477.2-201ENST00000447405 C19orf67A6NJJ6 358 aa11.83□□□□□ -0.52
AP000477.2-201ENST00000447405 CD44P16070 742 aaKnown RBP11.79□□□□□ -0.52
AP000477.2-201ENST00000447405 PLCD3Q8N3E9 789 aa11.78□□□□□ -0.52
AP000477.2-201ENST00000447405 MNX1P50219 401 aaPredicted RBP11.77□□□□□ -0.53
AP000477.2-201ENST00000447405 NPM1P06748 294 aaKnown RBP eCLIP11.7□□□□□ -0.54
AP000477.2-201ENST00000447405 ZRANB1Q9UGI0 708 aa11.7□□□□□ -0.54
AP000477.2-201ENST00000447405 PLEKHG5O94827 1062 aa11.69□□□□□ -0.54
AP000477.2-201ENST00000447405 FBXO3Q9UK99 471 aa11.69□□□□□ -0.54
AP000477.2-201ENST00000447405 TSPYL2Q9H2G4 693 aaPredicted RBP11.65□□□□□ -0.54
AP000477.2-201ENST00000447405 GABBR2O75899 941 aa11.64□□□□□ -0.55
AP000477.2-201ENST00000447405 VASPP50552 380 aaPredicted RBP11.61□□□□□ -0.55
AP000477.2-201ENST00000447405 PAK3O75914 559 aaPredicted RBP11.6□□□□□ -0.55
AP000477.2-201ENST00000447405 PHF12Q96QT6 1004 aa11.6□□□□□ -0.55
AP000477.2-201ENST00000447405 RASEFQ8IZ41 740 aa11.58□□□□□ -0.56
AP000477.2-201ENST00000447405 KLHL34Q8N239 644 aa11.57□□□□□ -0.56
AP000477.2-201ENST00000447405 ZNF579Q8NAF0 562 aaKnown RBP11.54□□□□□ -0.56
AP000477.2-201ENST00000447405 ZBTB47Q9UFB7 747 aaPredicted RBP11.51□□□□□ -0.57
AP000477.2-201ENST00000447405 NUBP1P53384 320 aa11.5□□□□□ -0.57
AP000477.2-201ENST00000447405 GALR2O43603 387 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms