Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HLA-DOBP13765 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HLA-DOBP13765 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC5.88□□□□□ -1.47
HLA-DOBP13765 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DOBP13765 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DOBP13765 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DOBP13765 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DOBP13765 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DOBP13765 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DOBP13765 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DOBP13765 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DOBP13765 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DOBP13765 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DOBP13765 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DOBP13765 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DOBP13765 PPIAP24-201ENST00000328558 471 ntBASIC5.87□□□□□ -1.47
HLA-DOBP13765 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.87□□□□□ -1.47
HLA-DOBP13765 RN7SKP118-201ENST00000364331 330 ntBASIC5.87□□□□□ -1.47
HLA-DOBP13765 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 AC068138.1-201ENST00000412635 217 ntBASIC5.87□□□□□ -1.47
HLA-DOBP13765 CDC42P6-201ENST00000421246 576 ntBASIC5.87□□□□□ -1.47
HLA-DOBP13765 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 RPS19P6-201ENST00000441327 433 ntBASIC5.87□□□□□ -1.47
HLA-DOBP13765 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 TVP23CP1-201ENST00000450317 639 ntBASIC5.87□□□□□ -1.47
HLA-DOBP13765 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 AC092824.1-201ENST00000483524 576 ntBASIC5.87□□□□□ -1.47
HLA-DOBP13765 AC009567.2-201ENST00000502989 349 ntBASIC5.87□□□□□ -1.47
HLA-DOBP13765 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 AC093325.1-201ENST00000508378 326 ntBASIC5.87□□□□□ -1.47
HLA-DOBP13765 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 AC008429.2-201ENST00000523057 864 ntBASIC5.87□□□□□ -1.47
HLA-DOBP13765 AP004607.6-201ENST00000525033 1202 ntBASIC5.87□□□□□ -1.47
HLA-DOBP13765 AC006518.1-201ENST00000541449 943 ntBASIC5.87□□□□□ -1.47
HLA-DOBP13765 FCF1-203ENST00000553615 954 ntTSL 3 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 RPL29P33-201ENST00000587474 316 ntBASIC5.87□□□□□ -1.47
HLA-DOBP13765 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 CYCSP1-201ENST00000604815 315 ntBASIC5.87□□□□□ -1.47
HLA-DOBP13765 MIR6070-201ENST00000613967 103 ntBASIC5.87□□□□□ -1.47
HLA-DOBP13765 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DOBP13765 AP001264.1-201ENST00000620602 703 ntBASIC5.87□□□□□ -1.47
HLA-DOBP13765 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DOBP13765 RAB28P4-201ENST00000622233 665 ntBASIC5.87□□□□□ -1.47
HLA-DOBP13765 AC091059.2-201ENST00000623355 614 ntBASIC5.87□□□□□ -1.47
HLA-DOBP13765 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DOBP13765 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 AC006213.6-201ENST00000623722 4179 ntBASIC5.87□□□□□ -1.47
HLA-DOBP13765 CASC19-243ENST00000641588 1546 ntBASIC5.87□□□□□ -1.47
HLA-DOBP13765 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 AC062022.1-201ENST00000451026 1684 ntBASIC5.87□□□□□ -1.47
HLA-DOBP13765 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DOBP13765 MTHFD1P1-201ENST00000413059 2764 ntBASIC5.87□□□□□ -1.47
HLA-DOBP13765 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DOBP13765 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DOBP13765 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DOBP13765 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
HLA-DOBP13765 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DOBP13765 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DOBP13765 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DOBP13765 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
HLA-DOBP13765 AC018765.1-201ENST00000623357 3446 ntBASIC5.86□□□□□ -1.47
HLA-DOBP13765 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DOBP13765 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DOBP13765 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DOBP13765 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC5.86□□□□□ -1.47
HLA-DOBP13765 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DOBP13765 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC5.86□□□□□ -1.47
HLA-DOBP13765 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DOBP13765 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
HLA-DOBP13765 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC5.86□□□□□ -1.47
HLA-DOBP13765 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.86□□□□□ -1.47
HLA-DOBP13765 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
HLA-DOBP13765 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DOBP13765 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DOBP13765 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DOBP13765 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.86□□□□□ -1.47
HLA-DOBP13765 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC5.86□□□□□ -1.47
HLA-DOBP13765 NEK2P2-201ENST00000438441 1338 ntBASIC5.86□□□□□ -1.47
HLA-DOBP13765 AC022613.3-201ENST00000560740 1346 ntBASIC5.86□□□□□ -1.47
HLA-DOBP13765 RNA5SP308-201ENST00000362532 115 ntBASIC5.86□□□□□ -1.47
HLA-DOBP13765 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.86□□□□□ -1.47
HLA-DOBP13765 U3.52-201ENST00000384034 216 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms