RNA–Protein interactions for RNA: ENST00000612123.3

PBX1-221, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 6,062 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-221ENST00000612123 NISCHQ9Y2I1 1504 aa12.37□□□□□ -0.43
PBX1-221ENST00000612123 DCAF8L2P0C7V8 631 aa11.7□□□□□ -0.54
PBX1-221ENST00000612123 PPARGC1BQ86YN6 1023 aaKnown RBP11.4□□□□□ -0.58
PBX1-221ENST00000612123 SUPT5HO00267 1087 aaKnown RBP10.97□□□□□ -0.65
PBX1-221ENST00000612123 CCDC180Q9P1Z9 1646 aa10.94□□□□□ -0.66
PBX1-221ENST00000612123 ABCC9O60706 1549 aa10.9□□□□□ -0.67
PBX1-221ENST00000612123 SCAF1Q9H7N4 1312 aaKnown RBP10.88□□□□□ -0.67
PBX1-221ENST00000612123 PCGF6Q9BYE7 350 aa10.87□□□□□ -0.67
PBX1-221ENST00000612123 SHROOM4Q9ULL8 1493 aa10.82□□□□□ -0.68
PBX1-221ENST00000612123 HRCP23327 699 aa10.75□□□□□ -0.69
PBX1-221ENST00000612123 PELP1Q8IZL8 1130 aaKnown RBP10.67□□□□□ -0.7
PBX1-221ENST00000612123 FAM9AQ8IZU1 332 aaPredicted RBP10.61□□□□□ -0.71
PBX1-221ENST00000612123 EHMT2Q96KQ7 1210 aa10.61□□□□□ -0.71
PBX1-221ENST00000612123 PRKCSHP14314 528 aaPredicted RBP10.57□□□□□ -0.72
PBX1-221ENST00000612123 APLP2Q06481 763 aa10.53□□□□□ -0.72
PBX1-221ENST00000612123 BCL11AQ9H165 835 aa10.51□□□□□ -0.73
PBX1-221ENST00000612123 RB1CC1Q8TDY2 1594 aa10.49□□□□□ -0.73
PBX1-221ENST00000612123 DCAF1Q9Y4B6 1507 aa10.44□□□□□ -0.74
PBX1-221ENST00000612123 GTF3C3Q9Y5Q9 886 aa10.44□□□□□ -0.74
PBX1-221ENST00000612123 YTHDC1Q96MU7 727 aaKnown RBP10.43□□□□□ -0.74
PBX1-221ENST00000612123 ZCCHC6Q5VYS8 1495 aaKnown RBP10.42□□□□□ -0.74
PBX1-221ENST00000612123 NEUROD1Q13562 356 aa10.4□□□□□ -0.74
PBX1-221ENST00000612123 NACADO15069 1562 aa10.39□□□□□ -0.75
PBX1-221ENST00000612123 MYO15BQ96JP2 1530 aa10.35□□□□□ -0.75
PBX1-221ENST00000612123 TRIM41Q8WV44 630 aa10.33□□□□□ -0.76
PBX1-221ENST00000612123 PABPN1Q86U42 306 aaKnown RBP eCLIP10.32□□□□□ -0.76
PBX1-221ENST00000612123 MYT1Q01538 1121 aa10.22□□□□□ -0.77
PBX1-221ENST00000612123 CCDC136Q96JN2 1154 aa10.18□□□□□ -0.78
PBX1-221ENST00000612123 TTBK1Q5TCY1 1321 aaPredicted RBP10.17□□□□□ -0.78
PBX1-221ENST00000612123 UBTFP17480 764 aaKnown RBP10.16□□□□□ -0.78
PBX1-221ENST00000612123 CSRNP3Q8WYN3 585 aa10.14□□□□□ -0.79
PBX1-221ENST00000612123 LOC105371045A0A1W2PR82 267 aa10.13□□□□□ -0.79
PBX1-221ENST00000612123 ACIN1Q9UKV3 1341 aaKnown RBP10.12□□□□□ -0.79
PBX1-221ENST00000612123 ANO8Q9HCE9 1232 aaPredicted RBP10.1□□□□□ -0.79
PBX1-221ENST00000612123 ZEB1P37275 1124 aaPredicted RBP10.09□□□□□ -0.79
PBX1-221ENST00000612123 SCRIBQ14160 1630 aa10.09□□□□□ -0.79
PBX1-221ENST00000612123 ATP1B4Q9UN42 357 aaPredicted RBP10.05□□□□□ -0.8
PBX1-221ENST00000612123 RANGAP1P46060 587 aaPredicted RBP10.01□□□□□ -0.81
PBX1-221ENST00000612123 BCANQ96GW7 911 aa10□□□□□ -0.81
PBX1-221ENST00000612123 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.98□□□□□ -0.81
PBX1-221ENST00000612123 CENPBP07199 599 aaPredicted RBP9.96□□□□□ -0.81
PBX1-221ENST00000612123 RTN4Q9NQC3 1192 aaKnown RBP9.94□□□□□ -0.82
PBX1-221ENST00000612123 CCER1Q8TC90 406 aaPredicted RBP9.93□□□□□ -0.82
PBX1-221ENST00000612123 PLEKHG5O94827 1062 aa9.91□□□□□ -0.82
PBX1-221ENST00000612123 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.9□□□□□ -0.82
PBX1-221ENST00000612123 CHIC1Q5VXU3 224 aa9.89□□□□□ -0.83
PBX1-221ENST00000612123 SALL2Q9Y467 1007 aaPredicted RBP9.84□□□□□ -0.83
PBX1-221ENST00000612123 HNRNPUL2Q1KMD3 747 aaKnown RBP9.83□□□□□ -0.84
PBX1-221ENST00000612123 ANP32EQ9BTT0 268 aa9.82□□□□□ -0.84
PBX1-221ENST00000612123 TRIM26Q12899 539 aaPredicted RBP9.82□□□□□ -0.84
PBX1-221ENST00000612123 ERICH6Q7L0X2 663 aa9.82□□□□□ -0.84
PBX1-221ENST00000612123 CECR2Q9BXF3 1484 aa9.81□□□□□ -0.84
PBX1-221ENST00000612123 AEBP2Q6ZN18 517 aaPredicted RBP9.81□□□□□ -0.84
PBX1-221ENST00000612123 DIEXFQ68CQ4 756 aaKnown RBP9.79□□□□□ -0.84
PBX1-221ENST00000612123 ITGAEP38570 1179 aa9.75□□□□□ -0.85
PBX1-221ENST00000612123 MYT1LQ9UL68 1186 aa9.74□□□□□ -0.85
PBX1-221ENST00000612123 ERCC6Q03468 1493 aa9.74□□□□□ -0.85
PBX1-221ENST00000612123 SMARCA2P51531 1590 aa9.69□□□□□ -0.86
PBX1-221ENST00000612123 BAZ1BQ9UIG0 1483 aaKnown RBP9.69□□□□□ -0.86
PBX1-221ENST00000612123 TSHZ2Q9NRE2 1034 aa9.67□□□□□ -0.86
PBX1-221ENST00000612123 BAZ1AQ9NRL2 1556 aaPredicted RBP9.67□□□□□ -0.86
PBX1-221ENST00000612123 EIF4G1Q04637 1599 aaKnown RBP9.67□□□□□ -0.86
PBX1-221ENST00000612123 EIF5BO60841 1220 aaKnown RBP9.66□□□□□ -0.86
PBX1-221ENST00000612123 CC2D2AQ9P2K1 1620 aa9.65□□□□□ -0.86
PBX1-221ENST00000612123 CNGB1Q14028 1251 aaPredicted RBP9.65□□□□□ -0.87
PBX1-221ENST00000612123 NBR1Q14596 966 aa9.64□□□□□ -0.87
PBX1-221ENST00000612123 MIER1Q8N108 512 aa9.63□□□□□ -0.87
PBX1-221ENST00000612123 NEFLP07196 543 aa9.62□□□□□ -0.87
PBX1-221ENST00000612123 BICRAQ9NZM4 1560 aa9.62□□□□□ -0.87
PBX1-221ENST00000612123 UNC13AQ9UPW8 1703 aa9.61□□□□□ -0.87
PBX1-221ENST00000612123 DNAJC5BQ9UF47 199 aa9.61□□□□□ -0.87
PBX1-221ENST00000612123 CDK11AQ9UQ88 783 aaPredicted RBP9.57□□□□□ -0.88
PBX1-221ENST00000612123 FBLN2P98095 1184 aa9.56□□□□□ -0.88
PBX1-221ENST00000612123 PDS5BQ9NTI5 1447 aa9.56□□□□□ -0.88
PBX1-221ENST00000612123 IL27Q8NEV9 243 aa9.55□□□□□ -0.88
PBX1-221ENST00000612123 TIMELESSQ9UNS1 1208 aa9.55□□□□□ -0.88
PBX1-221ENST00000612123 SUPT16HQ9Y5B9 1047 aaKnown RBP9.54□□□□□ -0.88
PBX1-221ENST00000612123 RSF1Q96T23 1441 aaPredicted RBP9.54□□□□□ -0.88
PBX1-221ENST00000612123 FAM50AQ14320 339 aaKnown RBP9.53□□□□□ -0.88
PBX1-221ENST00000612123 C11orf95C9JLR9 678 aaPredicted RBP9.53□□□□□ -0.88
PBX1-221ENST00000612123 SMARCA4P51532 1647 aa9.5□□□□□ -0.89
PBX1-221ENST00000612123 IRX6P78412 446 aaPredicted RBP9.5□□□□□ -0.89
PBX1-221ENST00000612123 MSH5O43196 834 aa9.5□□□□□ -0.89
PBX1-221ENST00000612123 ATAD2BQ9ULI0 1458 aa9.5□□□□□ -0.89
PBX1-221ENST00000612123 NCAPD3P42695 1498 aa9.49□□□□□ -0.89
PBX1-221ENST00000612123 A0A0U1RQG5 324 aaPredicted RBP9.49□□□□□ -0.89
PBX1-221ENST00000612123 TRIM52Q96A61 297 aa9.47□□□□□ -0.89
PBX1-221ENST00000612123 KCNH8Q96L42 1107 aa9.47□□□□□ -0.89
PBX1-221ENST00000612123 DEKP35659 375 aaKnown RBP9.47□□□□□ -0.89
PBX1-221ENST00000612123 POLR3GLQ9BT43 218 aa9.46□□□□□ -0.89
PBX1-221ENST00000612123 TOP2AP11388 1531 aaKnown RBP9.46□□□□□ -0.9
PBX1-221ENST00000612123 PEG3Q9GZU2 1588 aa9.45□□□□□ -0.9
PBX1-221ENST00000612123 NPM1P06748 294 aaKnown RBP eCLIP9.44□□□□□ -0.9
PBX1-221ENST00000612123 HMGXB3Q12766 1538 aa9.43□□□□□ -0.9
PBX1-221ENST00000612123 EEA1Q15075 1411 aa9.42□□□□□ -0.9
PBX1-221ENST00000612123 SENP3-EIF4A1A0A087X0R7 540 aa9.41□□□□□ -0.9
PBX1-221ENST00000612123 FKBP8Q14318 412 aa9.41□□□□□ -0.9
PBX1-221ENST00000612123 RBM19Q9Y4C8 960 aaKnown RBP9.41□□□□□ -0.9
PBX1-221ENST00000612123 MROH2BQ7Z745 1585 aa9.4□□□□□ -0.91
PBX1-221ENST00000612123 CADPSQ9ULU8 1353 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms