RNA–Protein interactions for RNA: ENST00000368317.3

RSPO3-202, Transcript of R-spondin 3, humanhuman

TSL 2 BASIC

Gene RSPO3, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3-202ENST00000368317 AEBP2Q6ZN18 517 aaPredicted RBP23.5■■□□□ 1.35
RSPO3-202ENST00000368317 CHIC1Q5VXU3 224 aa22.43■■□□□ 1.18
RSPO3-202ENST00000368317 SENP3Q9H4L4 574 aaPredicted RBP20.08■□□□□ 0.81
RSPO3-202ENST00000368317 PHF23Q9BUL5 403 aaPredicted RBP19.83■□□□□ 0.77
RSPO3-202ENST00000368317 FOXD1Q16676 465 aa18.77■□□□□ 0.6
RSPO3-202ENST00000368317 POTEDQ86YR6 584 aa18.42■□□□□ 0.54
RSPO3-202ENST00000368317 PLPPR3Q6T4P5 718 aa18■□□□□ 0.47
RSPO3-202ENST00000368317 MSH5O43196 834 aa17.83■□□□□ 0.44
RSPO3-202ENST00000368317 NISCHQ9Y2I1 1504 aa17.7■□□□□ 0.42
RSPO3-202ENST00000368317 PPP6R1Q9UPN7 881 aa17.53■□□□□ 0.4
RSPO3-202ENST00000368317 ADRA2BP18089 450 aa17.52■□□□□ 0.4
RSPO3-202ENST00000368317 PIAS4Q8N2W9 510 aaPredicted RBP17.51■□□□□ 0.39
RSPO3-202ENST00000368317 SCAF1Q9H7N4 1312 aaKnown RBP16.07■□□□□ 0.16
RSPO3-202ENST00000368317 ABCC9O60706 1549 aa16.05■□□□□ 0.16
RSPO3-202ENST00000368317 MAPK8IP2Q13387 824 aaPredicted RBP16.05■□□□□ 0.16
RSPO3-202ENST00000368317 CCDC180Q9P1Z9 1646 aa16.01■□□□□ 0.15
RSPO3-202ENST00000368317 DMRT2Q9Y5R5 561 aa15.92■□□□□ 0.14
RSPO3-202ENST00000368317 PPP4R3CPQ6ZMV5 832 aa15.79■□□□□ 0.12
RSPO3-202ENST00000368317 CACNB1Q02641 598 aaPredicted RBP15.67■□□□□ 0.1
RSPO3-202ENST00000368317 CNKSR2Q8WXI2 1034 aa15.47■□□□□ 0.07
RSPO3-202ENST00000368317 DCAF8L1A6NGE4 600 aa15.35■□□□□ 0.05
RSPO3-202ENST00000368317 HOXD11P31277 338 aaPredicted RBP15.35■□□□□ 0.05
RSPO3-202ENST00000368317 RNF216Q9NWF9 866 aaPredicted RBP15.29■□□□□ 0.04
RSPO3-202ENST00000368317 RB1CC1Q8TDY2 1594 aa15.26■□□□□ 0.03
RSPO3-202ENST00000368317 NCBP3Q53F19 620 aaKnown RBP15.25■□□□□ 0.03
RSPO3-202ENST00000368317 RNF39Q9H2S5 420 aa15.14■□□□□ 0.01
RSPO3-202ENST00000368317 NACADO15069 1562 aa15.12■□□□□ 0.01
RSPO3-202ENST00000368317 DNAJC5BQ9UF47 199 aa15.12■□□□□ 0.01
RSPO3-202ENST00000368317 NPM3O75607 178 aaKnown RBP14.98□□□□□ -0.01
RSPO3-202ENST00000368317 UNC13AQ9UPW8 1703 aa14.96□□□□□ -0.01
RSPO3-202ENST00000368317 C1QBPQ07021 282 aaKnown RBP14.91□□□□□ -0.02
RSPO3-202ENST00000368317 MYO15BQ96JP2 1530 aa14.9□□□□□ -0.02
RSPO3-202ENST00000368317 BICRAQ9NZM4 1560 aa14.85□□□□□ -0.03
RSPO3-202ENST00000368317 PABPN1Q86U42 306 aaKnown RBP eCLIP14.84□□□□□ -0.03
RSPO3-202ENST00000368317 DCAF8L2P0C7V8 631 aa14.79□□□□□ -0.04
RSPO3-202ENST00000368317 KCNA4P22459 653 aa14.78□□□□□ -0.04
RSPO3-202ENST00000368317 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.71□□□□□ -0.05
RSPO3-202ENST00000368317 ZCCHC6Q5VYS8 1495 aaKnown RBP14.69□□□□□ -0.06
RSPO3-202ENST00000368317 SHROOM4Q9ULL8 1493 aa14.67□□□□□ -0.06
RSPO3-202ENST00000368317 DCAF1Q9Y4B6 1507 aa14.66□□□□□ -0.06
RSPO3-202ENST00000368317 SCRIBQ14160 1630 aa14.54□□□□□ -0.08
RSPO3-202ENST00000368317 CC2D2AQ9P2K1 1620 aa14.54□□□□□ -0.08
RSPO3-202ENST00000368317 EIF4G1Q04637 1599 aaKnown RBP14.49□□□□□ -0.09
RSPO3-202ENST00000368317 CECR2Q9BXF3 1484 aa14.49□□□□□ -0.09
RSPO3-202ENST00000368317 U3KPZ7 1027 aaPredicted RBP14.35□□□□□ -0.11
RSPO3-202ENST00000368317 POTEHQ6S545 545 aa14.32□□□□□ -0.12
RSPO3-202ENST00000368317 SLC4A2P04920 1241 aa14.26□□□□□ -0.13
RSPO3-202ENST00000368317 CAPN15O75808 1086 aa14.15□□□□□ -0.14
RSPO3-202ENST00000368317 SPINK5Q9NQ38 1064 aaPredicted RBP14.13□□□□□ -0.15
RSPO3-202ENST00000368317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.03□□□□□ -0.16
RSPO3-202ENST00000368317 APLP2Q06481 763 aa14.03□□□□□ -0.16
RSPO3-202ENST00000368317 HNRNPUL2Q1KMD3 747 aaKnown RBP14.03□□□□□ -0.16
RSPO3-202ENST00000368317 SLC4A1APQ9BWU0 796 aaKnown RBP14.01□□□□□ -0.17
RSPO3-202ENST00000368317 DSG3P32926 999 aa13.99□□□□□ -0.17
RSPO3-202ENST00000368317 DNAJC5Q9H3Z4 198 aa13.98□□□□□ -0.17
RSPO3-202ENST00000368317 TRHP20396 242 aaPredicted RBP13.95□□□□□ -0.18
RSPO3-202ENST00000368317 NCAPD3P42695 1498 aa13.94□□□□□ -0.18
RSPO3-202ENST00000368317 SAMD1Q6SPF0 538 aaPredicted RBP13.94□□□□□ -0.18
RSPO3-202ENST00000368317 CUX2O14529 1486 aa13.93□□□□□ -0.18
RSPO3-202ENST00000368317 ATAD2BQ9ULI0 1458 aa13.89□□□□□ -0.19
RSPO3-202ENST00000368317 ZNF219Q9P2Y4 722 aaPredicted RBP13.89□□□□□ -0.19
RSPO3-202ENST00000368317 HMGXB3Q12766 1538 aa13.89□□□□□ -0.19
RSPO3-202ENST00000368317 SMARCA4P51532 1647 aa13.87□□□□□ -0.19
RSPO3-202ENST00000368317 MYCNP04198 464 aaPredicted RBP13.87□□□□□ -0.19
RSPO3-202ENST00000368317 ERCC6Q03468 1493 aa13.86□□□□□ -0.19
RSPO3-202ENST00000368317 SMARCA2P51531 1590 aa13.85□□□□□ -0.19
RSPO3-202ENST00000368317 ABCB7O75027 752 aa13.81□□□□□ -0.2
RSPO3-202ENST00000368317 FOXD4L1Q9NU39 408 aa13.77□□□□□ -0.21
RSPO3-202ENST00000368317 NESP48681 1621 aa13.76□□□□□ -0.21
RSPO3-202ENST00000368317 PEG3Q9GZU2 1588 aa13.76□□□□□ -0.21
RSPO3-202ENST00000368317 BAZ1AQ9NRL2 1556 aaPredicted RBP13.76□□□□□ -0.21
RSPO3-202ENST00000368317 BAZ1BQ9UIG0 1483 aaKnown RBP13.74□□□□□ -0.21
RSPO3-202ENST00000368317 THOC2Q8NI27 1593 aaKnown RBP13.74□□□□□ -0.21
RSPO3-202ENST00000368317 LAMC3Q9Y6N6 1575 aa13.68□□□□□ -0.22
RSPO3-202ENST00000368317 MROH2BQ7Z745 1585 aa13.64□□□□□ -0.23
RSPO3-202ENST00000368317 EHMT2Q96KQ7 1210 aa13.64□□□□□ -0.23
RSPO3-202ENST00000368317 KIF21AQ7Z4S6 1674 aa13.63□□□□□ -0.23
RSPO3-202ENST00000368317 POLA2Q14181 598 aa13.58□□□□□ -0.24
RSPO3-202ENST00000368317 ZBTB22O15209 634 aa13.55□□□□□ -0.24
RSPO3-202ENST00000368317 PDS5BQ9NTI5 1447 aa13.54□□□□□ -0.24
RSPO3-202ENST00000368317 ATF5Q9Y2D1 282 aaPredicted RBP13.51□□□□□ -0.25
RSPO3-202ENST00000368317 WDR62O43379 1518 aa13.5□□□□□ -0.25
RSPO3-202ENST00000368317 MRC2Q9UBG0 1479 aa13.48□□□□□ -0.25
RSPO3-202ENST00000368317 CADPSQ9ULU8 1353 aa13.48□□□□□ -0.25
RSPO3-202ENST00000368317 WIZO95785 1651 aa13.47□□□□□ -0.25
RSPO3-202ENST00000368317 CEP164Q9UPV0 1460 aa13.4□□□□□ -0.26
RSPO3-202ENST00000368317 RBM42Q9BTD8 480 aaKnown RBP13.38□□□□□ -0.27
RSPO3-202ENST00000368317 FANCD2Q9BXW9 1451 aa13.36□□□□□ -0.27
RSPO3-202ENST00000368317 CFTRP13569 1480 aa13.34□□□□□ -0.27
RSPO3-202ENST00000368317 ATXN8OSP0DMR3 200 aa13.33□□□□□ -0.28
RSPO3-202ENST00000368317 TOP2AP11388 1531 aaKnown RBP13.32□□□□□ -0.28
RSPO3-202ENST00000368317 CHRDL2Q6WN34 429 aa13.3□□□□□ -0.28
RSPO3-202ENST00000368317 ZBTB12Q9Y330 459 aaPredicted RBP13.3□□□□□ -0.28
RSPO3-202ENST00000368317 RSF1Q96T23 1441 aaPredicted RBP13.29□□□□□ -0.28
RSPO3-202ENST00000368317 TRIM41Q8WV44 630 aa13.28□□□□□ -0.28
RSPO3-202ENST00000368317 URB2Q14146 1524 aaKnown RBP13.28□□□□□ -0.28
RSPO3-202ENST00000368317 PRDM2Q13029 1718 aa13.26□□□□□ -0.29
RSPO3-202ENST00000368317 OSCARQ8IYS5 282 aa13.14□□□□□ -0.31
RSPO3-202ENST00000368317 SP7Q8TDD2 431 aaPredicted RBP13.13□□□□□ -0.31
RSPO3-202ENST00000368317 CSRNP3Q8WYN3 585 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms